Query= MSMg01no191_j23.b1 MSMg01no191_j23.b1 CHROMAT_FILE:
MSMg01no191_j23.b1 PHD_FILE: MSMg01no191_j23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:08:18 2005
(313 letters)
>mm_chr8_31435315_31436030
Length = 716
Score = 561 bits (290), Expect = e-164
Identities = 305/310 (98%), Gaps = 3/310 (0%)
Strand = Plus / Plus
Query: 5 gaattcaatttattaaaaaaaaaa-caacctcctttgcagagaaaatgttcttcaaatag 63
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaatttattaaaaaaaaaaacaacctcctttgcagagaaaatgttcttcaaatag 264
Query: 64 cctcagtgattgtaaccatacatgaatagtgtggagtgcagtaaatgaaagtatcttcat 123
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cctcagtgattggaagcatacatgaatagtgtggagtgcagtaaatgaaagtatcttcat 324
Query: 124 ttagaaggtgattgaggcatgatgcctttgacatagtcacatttcacttaaccaagagga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttagaaggtgattgaggcatgatgcctttgacatagtcacatttcacttaaccaagagga 384
Query: 184 taaggacatcagtaaaagaactgggtgagaatgaaacagagaatgcttgtgatgtgattc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taaggacatcagtaaaagaactgggtgagaatgaaacagagaatgcttgtgatgtgattc 444
Query: 244 tagaaggaacaggaggattgaggcaatcatgtgtgtgaactg-aaatcagagccgaaa-t 301
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 445 tagaaggaacaggaggattgaggcaatcatgtgtgtgaactgtaaatcagagccgaaaat 504
Query: 302 gtgaagtacc 311
||||||||||
Sbjct: 505 gtgaagtacc 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 716
Length adjustment: 9
Effective length of query: 304
Effective length of database: 707
Effective search space: 214928
Effective search space used: 214928
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no191_j23.g1 MSMg01no191_j23.g1 CHROMAT_FILE:
MSMg01no191_j23.g1 PHD_FILE: MSMg01no191_j23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:08:18 2005
(287 letters)
>mm_chr8_31467023_31467709
Length = 687
Score = 532 bits (275), Expect = e-155
Identities = 284/287 (98%)
Strand = Plus / Minus
Query: 1 attatgttttgggtaaagttccataaactgagacttgagtgtgacgtggggtacccatgt 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 487 attatgttttgggtaaagttccataaactgagacttgagtgtgaggtggggtacccatgt 428
Query: 61 ccccagtgtcatgctgatactcatatagctagtaaaacatctgtgttctttgagcttcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ccccagtgtcatgctgatactcatatagctagtaaaacatctgtgttctttgagcttcag 368
Query: 121 aaggctttttcttatccttccaatacagaaaaaagatgctcaggataagagagtgatgga 180
|||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 367 aaggctttttcttatccttccagtacagaaaaaggatgctcaggataagagagtgatgga 308
Query: 181 gtattccggaagggtttgtgggggagctactgaagaaactgatgtccaattagacaggga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gtattccggaagggtttgtgggggagctactgaagaaactgatgtccaattagacaggga 248
Query: 241 caaaataagctaaaaagaggaaggaaaaatgattcttatctctttct 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 caaaataagctaaaaagaggaaggaaaaatgattcttatctctttct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
