Query= MSMg01no192_a23.b1 MSMg01no192_a23.b1 CHROMAT_FILE:
MSMg01no192_a23.b1 PHD_FILE: MSMg01no192_a23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:08:56 2005
(412 letters)
>mm_chr8_130211179_130211990
Length = 812
Score = 787 bits (407), Expect = 0.0
Identities = 407/407 (100%)
Strand = Plus / Plus
Query: 5 gaattcttgtcggcatctacagctcattgaaataagccagcaatgggtgatcttaaggtc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttgtcggcatctacagctcattgaaataagccagcaatgggtgatcttaaggtc 264
Query: 65 ttcaaccacatcttcatagtgtcttggctgtgaaaatcaattttcacctattaagacttg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttcaaccacatcttcatagtgtcttggctgtgaaaatcaattttcacctattaagacttg 324
Query: 125 tacacctctgagtgacacctattcagcctgccattggtagtttctgatacttctaattca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tacacctctgagtgacacctattcagcctgccattggtagtttctgatacttctaattca 384
Query: 185 tctccactaagaaataaaacatgctacctgccaagcccagctaagagatgggtatcagtc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tctccactaagaaataaaacatgctacctgccaagcccagctaagagatgggtatcagtc 444
Query: 245 ttgcccagatcccccatctcttctagctttttctgtcatatcttattcttggtccagccc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttgcccagatcccccatctcttctagctttttctgtcatatcttattcttggtccagccc 504
Query: 305 caccccacactatctctttgaatcttctttccatgtggttttacactgaggttttgatgc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 caccccacactatctctttgaatcttctttccatgtggttttacactgaggttttgatgc 564
Query: 365 acacatggttcaagtacaagtaaacacaacaacacttatcatactaa 411
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 acacatggttcaagtacaagtaaacacaacaacacttatcatactaa 611
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 812
Length adjustment: 9
Effective length of query: 403
Effective length of database: 803
Effective search space: 323609
Effective search space used: 323609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no192_a23.g1 MSMg01no192_a23.g1 CHROMAT_FILE:
MSMg01no192_a23.g1 PHD_FILE: MSMg01no192_a23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:08:56 2005
(171 letters)
>mm_chr8_130250452_130251022
Length = 571
Score = 302 bits (156), Expect = 9e-87
Identities = 168/174 (96%), Gaps = 4/174 (2%)
Strand = Plus / Minus
Query: 1 tccctaatcatttacttgggggcacaatattgccttcttgtgtcagcatacaaaatcagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tccctaatcatttacttgggggcacaatattgccttcttgtgtcagcatacaaaatcagg 257
Query: 61 ctaggcaaaatcatctcactttcccttgttgcttggagcagaaacttattacgttg---- 116
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 256 ttaggcaaaatcatctcactttcccttgttgcttggagcaggaacttattacgttgttga 197
Query: 117 gagagagagagagagagagagagagagagagagagagagagagagagagagaga 170
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 gagagagagagagagagagagagagagagagagagagagagagagagagagaga 143
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 73
Number of extensions: 29
Number of successful extensions: 29
Number of sequences better than 10.0: 1
Number of HSP's gapped: 26
Number of HSP's successfully gapped: 1
Length of query: 171
Length of database: 571
Length adjustment: 8
Effective length of query: 163
Effective length of database: 563
Effective search space: 91769
Effective search space used: 91769
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
