CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCTTTAATACACGTTGATTCTGTTTCTTACAAGTTTCCCGCAAGGA
GAAGCTTGACTTTTTTCTCTTTCATTTTTCCCCCTTTTTCACTGTCCTTT
GACATATCTAAGCTTTCAAGTTGCTATTGAACTGAGCTCAAATGCTATCT
CTACAAATAGCCTGACCTTGCCAATCACTAGTCCTTCCTTTGGATAATAT
GTGACCCTCCTCATATCTCCTCACATTCTACTTTTGACAGTCTCACCAGG
GGTTTCCTTTCACTTTGTTCCTCAACCCAGAGGGTTCCCAGTTCTGCACC
TCATCTATATCCCAGGGAGAAAAGCATTCTGGCCAACCTGACTATATTAA
GAATGAAATGATCTTCAGTTGAAGAGACACATTGATGGCATGACATTAAA
ATGAATATAGACAGCAAAGGCGATGCTTCAAAGAGAGAATCAACATGATA
TACTTCCTTGACAATGTAATTGACCAAAACCAAACAGGATTAAACTCACA
TTTCTATTCTGGAAGCTGTGATTGACTGTCTTTTACATGAGTTCAAATGG
TTGTACTCATTTAGACATTGGATTTTCATTTGAACTTTGTTTATTCCCAT
ATTCATGGTGAATTGTTTTTGTATATACCTTAGGAAACGAAGGANAGTAG
AATTAGAAAGAACTTCATGCTAACT

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCACAGGCCCAAAGTGGGCCA
CAGCTCAAGGGAAGGTCCCAAGGCCAGATACTATTACTGAGGCTATGGAG
TGCTCACAAAAAGGACCTAGTATGACTGCACTCAACAAGCAGCTGAATCA
GATGCAGATATTGCACCCAACCAATGAACAGAAGCAGCTGACCCCTGTTG
TTGAATTAGGGAAGGCTGAGAGAAGCTGAGAAGAAGGGCAACCCTGTAGG
AGGACCAGCAGTTTCAATTACTCTAGACCCCTGAGATCTCTCGAACACTG
GACCACTAAGCAGGCAGCATCAACCAGCTGATATAAGGCCCACAACACAC
AGACAGCAGAGGACTTCCAGGTGTGTGTTCATTCAGAGATGATACATCTA
ACCCTCAAGAGACTGGAGGGCCCAGGAAGATTAGAGGTCAGGTGGATGGG
AGTGGGGATACCCGTATAGAGACAGGGGAGTGGGGAGGAGATATGGGATG
TGNNNNNNNNNNNNNNNNNNNGNNNNNNNTTNNNNNNNNNNNNNNNNNNT
TTNNTNTTNNTTTTTTTTNNTTTTTTTTTTTTTTTTTTTTNNNCCTTTTT
TTTTTTNTTTTTTTTTTTNNTCTTTTCTTCTCTTTTTTTTTTTCTTTTTT
TTTTTTNNTTTTCCCCCCCCCTTCCTTTTCT

Query= MSMg01no194_l03.b1 MSMg01no194_l03.b1 CHROMAT_FILE:
MSMg01no194_l03.b1 PHD_FILE: MSMg01no194_l03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:13:39 2005
         (680 letters)



>mm_chr8_103308603_103309681
          Length = 1079

 Score = 1257 bits (650), Expect = 0.0
 Identities = 670/677 (98%), Gaps = 1/677 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcctttaatacacgttgattctgtttcttacaagtttcccgcaaggagaagcttg 63
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctttaataca-gttgattctgtttcttacaagtttcccgcaaggagaagcttg 262

                                                                       
Query: 64  acttttttctctttcatttttccccctttttcactgtcctttgacatatctaagctttca 123
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 acttttttctgtttcatttttccccctttttcactgtcctttgacatatctaagctttca 322

                                                                       
Query: 124 agttgctattgaactgagctcaaatgctatctctacaaatagcctgaccttgccaatcac 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 agttgctattgaactgagctcaaatgctatctctacaaatagcctgaccttgccaatcac 382

                                                                       
Query: 184 tagtccttcctttggataatatgtgaccctcctcatatctcctcacattctacttttgac 243
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 383 tagtccttcctttggataatatgtgaccctcctcatatctcctcacattcgacttttgac 442

                                                                       
Query: 244 agtctcaccaggggtttcctttcactttgttcctcaacccagagggttcccagttctgca 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 agtctcaccaggggtttcctttcactttgttcctcaacccagagggttcccagttctgca 502

                                                                       
Query: 304 cctcatctatatcccagggagaaaagcattctggccaacctgactatattaagaatgaaa 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 cctcatctatatcccagggagaaaagcattctggccaacctgactatattaagaatgaaa 562

                                                                       
Query: 364 tgatcttcagttgaagagacacattgatggcatgacattaaaatgaatatagacagcaaa 423
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 563 tgatcttcagttgaagagacacattgatggcatgacattaaaatgaatatagacggcaaa 622

                                                                       
Query: 424 ggcgatgcttcaaagagagaatcaacatgatatacttccttgacaatgtaattgaccaaa 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ggcgatgcttcaaagagagaatcaacatgatatacttccttgacaatgtaattgaccaaa 682

                                                                       
Query: 484 accaaacaggattaaactcacatttctattctggaagctgtgattgactgtcttttacat 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 accaaacaggattaaactcacatttctattctggaagctgtgattgactgtcttttacat 742

                                                                       
Query: 544 gagttcaaatggttgtactcatttagacattggattttcatttgaactttgtttattccc 603
           | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 gtgttcaaagggttgtactcatttagacattggattttcatttgaactttgtttattccc 802

                                                                       
Query: 604 atattcatggtgaattgtttttgtatataccttaggaaacgaagganagtagaattagaa 663
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 803 atattcatggtgaattgtttttgtatataccttaggaaacgaaggaaagtagaattagaa 862

                            
Query: 664 agaacttcatgctaact 680
           |||||||||||||||||
Sbjct: 863 agaacttcatgctaact 879


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 680
Length of database: 1079
Length adjustment: 10
Effective length of query: 670
Effective length of database: 1069
Effective search space:   716230
Effective search space used:   716230
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)