TCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAAGAGAATCCGCGG
AATTCATTGTTTTTCATAGCTGAGTTCCATTGTGTAAATGTACCACATTT
TCTGAACATTAAATATTTTATTTATTCTTTTATTTCCTGTCTCATCCCCA
CCCCAAAAATCTCACCCTCACAAATCCTCCCTCCATTATTAACTTTGGTA
CTCCCCTGCCCTGGGACATCCAAGTCACTGCAAGATGAAGCGTTCTCTCC
CATTGAGGCCTCACTAGTCAGTACAGCTAGAGGAAGGGGATCCAATGGCA
GACAACACAGTCAGAAACAGGTCCCTCTCTAATTGTTAAGGGGCTGACGT
GTTGATCACATGAAGATGCTGCACATCTGCTACAAATGTGTTGGGAGCCT
AGATCCAGCCAATGCACACAGTTTGGTTGGTGGCTGTCTCTGAGTTTTCA
CGGGCCCAGGTTAGTTGACCCTGTAGGTCTTTCTGTGGTGTTCTTGACCA
CTCTGGCTCTCTCAATCCTATACCAACTCTTACAGATGACTCCCAGAGCT
TTGCCTGATATTTGGCTGTGGGTCTCTTCATCTGTTTCCATCTGCTGCTG
GATGAAGCTTCTTGGAAGACAGTTATACTAGTCTCAAGTCTACTAGTGCA
CCACACTATCATTGATAATGTTAGGGATCGCCCCTCTTCCCACGGTATGA
GTCTCAAGTTGACCCAGTCCATTGTATGCN

AATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCAGGACAGCCTGGGCTATACAGAGAA
GCCCTATACCCTGTCTCGGAAACAAACAAAAACAAACAAAACAAAAAAAT
AATCTTTGCAAATCAGCTGCTTTATGGATTTTCGACCAAAGCAAGTATAG
GAATTGTTCAAATTCCCATACAGTTTTCCCAAGTGTTGTGGTTTCTCACT
TCTGACTTTTATCTTTGAGGAATGTATGCAACACATATATGCTACCACCC
ATCTCTTTATTCAGCCTGTCCTCACCATATGTAATTCCTTCCCTACACCG
ATGTCATCTGGTCCATGCTATTAAGGGCTTTAACATAGAGATGCTGCTGC
TTTCCTTAAAGATCAACAGATGATTTAGGTATCTCATAGGTTACCTTCAT
TTCCTTATTTTCTCTCTTACTTTCAGTTCTCTTAGTGTTTTTTTTCTTTT
CTTTCTTTCCTTTTCTTTTCCTTTCTTTTTCCTTCCTTCCTTCCTTCCTT
CCTTCCTTCCTTCCCTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTT
TTAAAATCTAACATAATAATCCAAAATCAGAGTCAAATTGAGACAGGAAG
AGTGATGATAGGGACATCACTGCAGAATGGTTAGCTTGAAATGAGGTGGC
AAAAGATATTGAGTTGCAAATGGGATAACTTN

Query= MSMg01no195_k06.g1 MSMg01no195_k06.g1 CHROMAT_FILE:
MSMg01no195_k06.g1 PHD_FILE: MSMg01no195_k06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:14:55 2005
         (635 letters)



>mm_chr8_115610264_115611298
          Length = 1035

 Score = 1187 bits (614), Expect = 0.0
 Identities = 627/636 (98%), Gaps = 9/636 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   caggacagcctgggctatacagagaagccctataccctgtctcggaaacaaacaaaaaca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 caggacagcctgggctatacagagaagccctataccctgtctcggaaacaaacaaaaaca 617

                                                                       
Query: 61  aacaaaacaaaaaaataatctttgcaaatcagctgctttatggattttcgaccaaagcaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 aacaaaacaaaaaaataatctttgcaaatcagctgctttatggattttcgaccaaagcaa 557

                                                                       
Query: 121 gtataggaattgttcaaattcccatacagttttcccaagtgttgtggtttctcacttctg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 gtataggaattgttcaaattcccatacagttttcccaagtgttgtggtttctcacttctg 497

                                                                       
Query: 181 acttttatctttgaggaatgtatgcaacacatatatgctaccacccatctctttattcag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 acttttatctttgaggaatgtatgcaacacatatatgctaccacccatctctttattcag 437

                                                                       
Query: 241 cctgtcctcaccatatgtaattccttccctacaccgatgtcatctggtccatgctattaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 cctgtcctcaccatatgtaattccttccctacaccgatgtcatctggtccatgctattaa 377

                                                                       
Query: 301 gggctttaacatagagatgctgctgctttccttaaagatcaacagatgatttaggtatct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gggctttaacatagagatgctgctgctttccttaaagatcaacagatgatttaggtatct 317

                                                                       
Query: 361 cataggttaccttcatttccttattttctctcttactttcagttctcttagtgttttttt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 cataggttaccttcatttccttattttctctcttactttcagttctcttagtgttttttt 257

                                                                       
Query: 421 t-cttttctttctttccttttcttttcctttctttttccttccttccttccttccttcct 479
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 ttcttttctttctttccttttcttttcctttctttttccttccttccttccttccttcct 197

                                                                       
Query: 480 tccttccttccctccttccttccttccttccttccttcctttcttttttaaaatctaaca 539
           |||||||||||        |||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 tccttccttcc--------ttccttccttccttccttcctttcttttttaaaatctaaca 145

                                                                       
Query: 540 taataatccaaaatcagagtcaaattgagacaggaagagtgatgatagggacatcactgc 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 taataatccaaaatcagagtcaaattgagacaggaagagtgatgatagggacatcactgc 85

                                               
Query: 600 agaatggttagcttgaaatgaggtggcaaaagatat 635
           ||||||||||||||||||||||||||||||||||||
Sbjct: 84  agaatggttagcttgaaatgaggtggcaaaagatat 49


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 71
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1035
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1025
Effective search space:   640625
Effective search space used:   640625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)