Query= MSMg01no195_l05.b1 MSMg01no195_l05.b1 CHROMAT_FILE:
MSMg01no195_l05.b1 PHD_FILE: MSMg01no195_l05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:14:59 2005
(544 letters)
>mm_chr8_118406349_118407291
Length = 943
Score = 959 bits (496), Expect = 0.0
Identities = 508/512 (99%), Gaps = 1/512 (0%)
Strand = Plus / Minus
Query: 1 agccaatggttaatggttagaaacccgtccataaaaacgtggtcagcaggctataatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 agccaatggttaatggttagaaacccgtccataaaaacgtggtcagcaggctataatttt 746
Query: 61 ccctcttgaagattgcctcattgtgtagagatttttgctttatttgtttgtttgtttgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ccctcttgaagattgcctcattgtgtagagatttttgctttatttgtttgtttgtttgtt 686
Query: 121 tttaaagaaacttctgatgagatactaaaaataacgtggggtttattgttgaccaggatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tttaaagaaacttctgatgagatactaaaaataacgtggggtttattgttgaccaggatg 626
Query: 181 gctaagtgtttctaaatcagggtttcagtggatttgctgccgttaaatgtgagctttcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gctaagtgtttctaaatcagggtttcagtggatttgctgccgttaaatgtgagctttcta 566
Query: 241 tgggagggtgaaagtggggtgaagagggccagggtggaaacatactattctgtttgtttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgggagggtgaaagtggggtgaagagggccagggtggaaacatactattctgtttgtttg 506
Query: 301 gtttgaattctgtccccaaaccttccagtgaaccaaaggcattttctaagttgcaaaatc 360
|||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 505 gtttgaattctgtccccagaccttccagcgaaccaaaggcattt-ctaagttgcaaaatc 447
Query: 361 caagtacgtctttataattcatactgagtacctaacaccttacagaagcttccaaaatgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 caagtacgtctttataattcatactgagtacctaacaccttacagaagcttccaaaatgc 387
Query: 421 ttaagagattgcaaagaaatatagacaggatggatacgtgtcaaatgataggagaatccc 480
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 386 ttaagagattgcaaagaaatatagacaggatgaatacgtgtcaaatgataggagaatccc 327
Query: 481 ccctctatatataatatatgtgtgtgtgtgtg 512
||||||||||||||||||||||||||||||||
Sbjct: 326 ccctctatatataatatatgtgtgtgtgtgtg 295
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 943
Length adjustment: 10
Effective length of query: 534
Effective length of database: 933
Effective search space: 498222
Effective search space used: 498222
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no195_l05.g1 MSMg01no195_l05.g1 CHROMAT_FILE:
MSMg01no195_l05.g1 PHD_FILE: MSMg01no195_l05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:15:00 2005
(658 letters)
>mm_chr8_118357032_118358089
Length = 1058
Score = 1241 bits (642), Expect = 0.0
Identities = 651/654 (99%)
Strand = Plus / Plus
Query: 5 gcagacatgtaaagaaaacattgaaaatgcaatacattttactgatatggaaagtttttc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gcagacatgtaaagaaaacattgaaaatgcaatacattttactgatatggaaagtttttc 264
Query: 65 cttcccagtcgtgtgctaaggccaggttttccagaacattccttgccctgtttgtctgaa 124
|||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 265 cttcccagtcttgtgctaaggccaggttttccagaacattccttgccctgtttgcctgaa 324
Query: 125 gctctgatctttttcttacaagcacaccaggcctttgcagggtcctaaccacaaagaaat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gctctgatctttttcttacaagcacaccaggcctttgcagggtcctaaccacaaagaaat 384
Query: 185 tactttatgcatgcctgttttggagattttagctctttgaggagcaggtgggccccagtt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tactttatgcatgcctgttttggagattttagctctttgaggagcaggtgggccccagtt 444
Query: 245 cagatagagcagctggccagagttcagagtccaaaggcacacacatgatggtcaggtgca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cagatagagcagctggccagagttcagagtccaaaggcacacacatgatggtcaggtgca 504
Query: 305 agatggacagctattaactttgaggaggctgcagagttcatgaaactcaggtctggttct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agatggacagctattaactttgaggaggctgcagagttcatgaaactcaggtctggttct 564
Query: 365 atatgaggagagggtattttagctaatgaagagtgaaggagctttccagactagccaaga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 atatgaggagagggtattttagctaatgaagagtgaaggagctttccagactagccaaga 624
Query: 425 gattaagaaaatccatcaaagtgtaggcttcagagaggacccaaaagcatgtaaaactgc 484
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 625 gattaagaaaatccatcaaagtgtaggcttcagagaggacccaaaagcatgtaaaaatgc 684
Query: 485 acaggtatatgattttttttcctatctggggtccccttcaggaaagacttttgtgattaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 acaggtatatgattttttttcctatctggggtccccttcaggaaagacttttgtgattaa 744
Query: 545 aaccactctcccctggctgtaagtgtccctgagagattgactggcatccgaatgtgcata 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aaccactctcccctggctgtaagtgtccctgagagattgactggcatccgaatgtgcata 804
Query: 605 cagaagtggagctggaatccaagtttcattgtgaccttgctacttaccagcaaa 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 cagaagtggagctggaatccaagtttcattgtgaccttgctacttaccagcaaa 858
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space: 679104
Effective search space used: 679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
