XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCA
TTTCCCTTTCTGGGTGTTTTCCTAGCCATGTTCAGGTGCTTAGAGGAAGG
CAGGAAGTAGGTAGATAACTTAGCTTTACCCAACCTGAAGTTATACTAGG
TGCATTAAACAGTGAGACAGGCAAGCAATGGGGTTGAGGAATTTAGTATC
TTAGGGAATAAAACTAAATAATAAGGGAAAAAAAGAGGGACACAAAAAGG
TAATGTCTAGTGACTGAGTGGTGCAAAGATGCCAAATGAGGTCAGAATTC
TAAGGACAAGTTCCCAAGCTGCAACTGAGTTGGAAAGGCTGAGTAGTGAT
CAAAAGTCACACTGATGGGGTTGACAGGGTGGATCGGGCCTACAAGTGCA
CGTGTGTCTGTACCACAGACACAGGTCAAGAGCCTGGGAGCCCAGGGTAT
TGTTGGGTTTCACGTGGCTGCCGTATTAGAAGAGAATGAGTACAGGAAAG
TTCAGGTTCTACTTGGTGGTGGGAAGCTGAGGTTACGTGTACTTGATGGC
TGGCTTACATTTAGTTCCTGAGACTCTGGGGCTAATTGAGTGGTCAAGGT
GTGTACTAGTGTATAAGAGACACTGTTGAGACTAGACTGAAACACACTGC
CTGCAGCTATTAAGCAAGATGAGCCTAGAGTGCTTCCTCCTGGCTCTTCC
TTTGCATCTCATCTCTGCATTACACCCAAGCCTCCTTCCTATTCTTTG

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCATATTTAGAACAGGGTGGCCTTAAATCAC
AGCGATCATTCCATCTGTGCCTCCTGAGTGCAGGGTTAAAGGCCTATGTC
ACCACCCTGGGTTAAGGGTTTCGCTTTTAAAACAGTTTATTTTGAATTTT
GGTCTTTGGGACAGGGTGTAGTCCTGGCTTCCCTGGAACTTGCTCTGTAG
ACCAGGCTGGCCTCAAACTCACAGAGATTTGCTTGTCTCTCCCTCCCCGG
TGCTGGTATTAAATGCAAGCACCAGCACACCTGGCTTAATGAAGCAGGTT
CTATTGTTTGAACTCCATCTCGCTGCTTAAGCCTACCTTGGTTTTCTACC
TTTGGTCATCTTAACTCAGCCTCCTGAGAGCTGGGGTTACAGGTGTACAT
GATCAAGCGTGACACTAAAGCAGTTCCATTGGACACTGATCCGTGGCACA
TGCCTGTAATCCTAGCATTTGGAAGCTGAGGCAAGAGAAGCACAAATCCG
ATGCCAGCATGGCCTACACAGTGAGACTGTCTCCAAACACCCTAAGGGAT
ATAATAAGGGCGTAGCTTGCTCGATCACTTTTCCAGCGTGAGCAACCCAG
CGTGGAAAGACTGAAAAGAATGACTGGTAAGACTTACAGTGCTTCATGAT
CTCCGCTGTGAAGCGACCCCATGTTCATCTGTCCCAGACTCTGGTTC

Query= MSMg01no195_m20.b1 MSMg01no195_m20.b1 CHROMAT_FILE:
MSMg01no195_m20.b1 PHD_FILE: MSMg01no195_m20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:15:07 2005
         (549 letters)



>mm_chr8_93540056_93541004
          Length = 949

 Score = 1025 bits (530), Expect = 0.0
 Identities = 539/542 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcatttccctttctgggtgttttcctagccatgttcaggtgcttagaggaaggcag 64
           ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892 gaattcatttcccattatgggtgttttcctagccatgttcaggtgcttagaggaaggcag 833

                                                                       
Query: 65  gaagtaggtagataacttagctttacccaacctgaagttatactaggtgcattaaacagt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 gaagtaggtagataacttagctttacccaacctgaagttatactaggtgcattaaacagt 773

                                                                       
Query: 125 gagacaggcaagcaatggggttgaggaatttagtatcttagggaataaaactaaataata 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 gagacaggcaagcaatggggttgaggaatttagtatcttagggaataaaactaaataata 713

                                                                       
Query: 185 agggaaaaaaagagggacacaaaaaggtaatgtctagtgactgagtggtgcaaagatgcc 244
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 agggaaaaaaggagggacacaaaaaggtaatgtctagtgactgagtggtgcaaagatgcc 653

                                                                       
Query: 245 aaatgaggtcagaattctaaggacaagttcccaagctgcaactgagttggaaaggctgag 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 aaatgaggtcagaattctaaggacaagttcccaagctgcaactgagttggaaaggctgag 593

                                                                       
Query: 305 tagtgatcaaaagtcacactgatggggttgacagggtggatcgggcctacaagtgcacgt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 tagtgatcaaaagtcacactgatggggttgacagggtggatcgggcctacaagtgcacgt 533

                                                                       
Query: 365 gtgtctgtaccacagacacaggtcaagagcctgggagcccagggtattgttgggtttcac 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 gtgtctgtaccacagacacaggtcaagagcctgggagcccagggtattgttgggtttcac 473

                                                                       
Query: 425 gtggctgccgtattagaagagaatgagtacaggaaagttcaggttctacttggtggtggg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 gtggctgccgtattagaagagaatgagtacaggaaagttcaggttctacttggtggtggg 413

                                                                       
Query: 485 aagctgaggttacgtgtacttgatggctggcttacatttagttcctgagactctggggct 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 aagctgaggttacgtgtacttgatggctggcttacatttagttcctgagactctggggct 353

             
Query: 545 aa 546
           ||
Sbjct: 352 aa 351


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 949
Length adjustment: 10
Effective length of query: 539
Effective length of database: 939
Effective search space:   506121
Effective search space used:   506121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)