Query= MSMg01no197_h08.b1 MSMg01no197_h08.b1 CHROMAT_FILE:
MSMg01no197_h08.b1 PHD_FILE: MSMg01no197_h08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:17:21 2005
(313 letters)
>mm_chr8_76409409_76410121
Length = 713
Score = 572 bits (296), Expect = e-168
Identities = 305/308 (99%)
Strand = Plus / Minus
Query: 6 aattagacaccccattatttaaggatggacctagttcctatcccattcctaaggagagga 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 aattagacaccccattatttaaggatggacctagttcctatcccattcctaaggagagga 454
Query: 66 acattttaaggacaaactttcatgatttagcacactctggtctaagagttagttctcaag 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 acattttaaggacaaactttcatgatttagcacactctggtctaagagttagttctcaag 394
Query: 126 ttatatatttatttagaacagagaatgtatttacctagaaaaatcaatatttataactct 185
|| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 393 ttgtatatttatttagaacagagaatgtatttacctagaaaaatcaatttttataactct 334
Query: 186 tgtagtattctggtatagtacactgacttcaaagtatatttaatgtccattatgtgtgcg 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 tgtagtattctggtatagtacactgacttcaaagtatatttaatgtccattatgtgtgcg 274
Query: 246 gtacagttgggtgtgctgttcgttttgctgtgctatcagtgaagggacacattccctaac 305
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gtacagttgggtgtgctgttcattttgctgtgctatcagtgaagggacacattccctaac 214
Query: 306 ttggatct 313
||||||||
Sbjct: 213 ttggatct 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no197_h08.g1 MSMg01no197_h08.g1 CHROMAT_FILE:
MSMg01no197_h08.g1 PHD_FILE: MSMg01no197_h08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:17:22 2005
(334 letters)
>mm_chr8_76370468_76371201
Length = 734
Score = 603 bits (312), Expect = e-177
Identities = 326/334 (97%), Gaps = 6/334 (1%)
Strand = Plus / Plus
Query: 1 ccaggtgtggatgaaaatggaagtatcctgagggagatcctaactgaaacatggccaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 207 ccaggtgtggatgaaaatggaagtatcctgagggagatcctaactgaaacacggccaatt 266
Query: 61 acaattcgtcagaaaaggaaaaggaaaaggaaaaggaaaaggaaaaggaaaaggaaaagg 120
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 acaattcgtc------ggaaaaggaaaaggaaaaggaaaaggaaaaggaaaaggaaaagg 320
Query: 121 aaaaggaaaaggaaaaggaaaaggctaggaaacatctgatgtggacccatgcacaaagat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 aaaaggaaaaggaaaaggaaaaggctaggaaacatctgatgtggacccatgcacaaggat 380
Query: 181 gcagaatgcaagtacaagaaattcttatctgcacatagcctgcttgttctccatggggca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcagaatgcaagtacaagaaattcttatctgcacatagcctgcttgttctccatggggca 440
Query: 241 aaagtttcttggagttggaccctggcaagagaaatcccgtggcaaagagttatgttagcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaagtttcttggagttggaccctggcaagagaaatcccgtggcaaagagttatgttagcc 500
Query: 301 attggggcaaaataggaaagatcaaagtttcgtg 334
||||||||||||||||||||||||||||||||||
Sbjct: 501 attggggcaaaataggaaagatcaaagtttcgtg 534
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 14
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 734
Length adjustment: 9
Effective length of query: 325
Effective length of database: 725
Effective search space: 235625
Effective search space used: 235625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
