CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAGCATTTTTCTCAAAGAAAACACAGTGAGGTTTGTAACAGTGACCT
CTCAGTTTTGGCACCTGTATCCGTTCGAGTTTCATTTTACTTTTGATGCT
GTTGCAAATAATCTAAGAAAAGCAAGGATTTTTGTTTTTGTTTGTTTTGA
TAATTTGGACTGAAATTAATTCCAGGTTACAGCCCATTATTGGTGGAAAT
CAAGGCAGGAGTTTAAGCATCCTATTCACACTCTATAGTAGATAAAGAAT
AAATAATCCTGTCTGTTTGCTCTTTTGTACTTGTACACATTTAACTTTCT
TCATTCATAGAGTCCAGGGTCCACTCCACAAAATGTTGCCTTTCATATCC
ATCTGGATGTTTTCAGATCAATCAGAAATCAAGATGAGTCCCCCATAGGC
CAACATGACTTACATAACTCATCATTAAGATTCTTTCCCCTGGTGATTCT
AGGTAGGGTCTTGTTGACAGTCAAAATCAACCAACACAAAGTCTAAATAT
TCCTTTTAGTTCCTTCTAATCATTATTCAGTAACCATGTATGTTCATTTC
CTTTCCTGTTTTGATGAAAGGGAAGTTTGTTTTTTTCTAATAGTTTGGAG
GCATAGAGACCATCATGGTGGAAAGCTAAAGGATGGTGAGGTATCTGTTC
ACATGACAG

GGGGAAATGAGGGATATGGGGTAGGTGGGGGGAGAAAATGGCATTTGGTA
TGGGGGAGGGAATGATAGGGAGAAGGGGGGAAGAAGGGGTGGTTTCAAGA
ATAGGAGGTGACGGGATGGGAATTTTCCGAAAAAAGGGGNGGGGAAGGGG
GGTTTTAAAAAGGGGGGGGGGAGGGAAGAGGTTTTTTTTTTCCCCAAAAA
AAAAGGGGGGGGGGGATGTATTAGGGGATTGTTGAGTGTGGATGGGGGTT
TTTGGAGAGGGGGGGGTAGGTGGGGTTGGGAGGCGAGGGGGGAGTTTTGG
GGAGTGAGGCTATAAGTGTGGAGAGGGGAAAGAAGGCGGAGAAGGTGAAA
TATGAAAAAAGGGTGAGGGGGAAGGATGAAAGATAAAAGGGTAAGAGAGG
GAGAGGGGGGAGAGGTTGGAAGGGGGGAGGGTAAATGGTGTATGGTGTGG
GCGGAAGGAAATGGATTTGAGAGGGGGGGGGAGAGGAAGGAGGGGAGATT
GGGGGTGGGGTGATTTATTGTGTAGGGAGAAGAGGGAGCAAAAGAGTGTA
GTGGAGGGGGTATGTGGGGGGTTTTTGTGGCGGAAAAAAAAAAAAAAAAT
ATATGTGGGGAGGGAGGGGGGATAAAGGTGTGGGTAGGGGATGGGATATT
TTGTTGGAGGGGGGAGGGATATGGATGGGGGGGGGGGGGGGGTTTGGAAA
AAAAAAAATAGGGGAGAAATGGGGAAAGTGGGTGGTAAGGTATGGTAAGT
GTGTAGAATTAAAATTAGGTCGTTAAGGAGAGGGTAGAGATTGGGGAGGG
GTGAGAGGTGGTAGTAGGGGAGGGAGTGGGGGGGAATAGGGGGTGGGAGT
GTTGTGTGGTATAGGGGGGGGGGGGAAAGAAAAAGAGGGAAGGGAGGGGA
GAATTGTTGGAAGGTGTTAGAGAGAGGGAGGATGGTGGTGAGGATGATGG
TAGAGT

Query= MSMg01no197_o23.b1 MSMg01no197_o23.b1 CHROMAT_FILE:
MSMg01no197_o23.b1 PHD_FILE: MSMg01no197_o23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:17:59 2005
         (559 letters)



>mm_chr8_84201074_84202031
          Length = 958

 Score = 1073 bits (555), Expect = 0.0
 Identities = 558/559 (99%), Gaps = 1/559 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gagtttcattttacttttgatgctgttgcaaataatctaagaaaagcaaggatttttgtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gagtttcattttacttttgatgctgttgcaaataatctaagaaaagcaaggatttttgtt 260

                                                                       
Query: 61  tttgtttgttttgataatttggactgaaattaattccaggttacagcccattattggtgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttgtttgttttgataatttggactgaaattaattccaggttacagcccattattggtgg 320

                                                                       
Query: 121 aaatcaaggcaggagtttaagcatcctattcacactctatagtagataaagaataaataa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaatcaaggcaggagtttaagcatcctattcacactctatagtagataaagaataaataa 380

                                                                       
Query: 181 tcctgtctgtttgctcttttgtacttgtacacatttaactttcttcattcatagagtcca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcctgtctgtttgctcttttgtacttgtacacatttaactttcttcattcatagagtcca 440

                                                                       
Query: 241 gggtccactccacaaaatgttgcctttcatatccatctggatgttttcagatcaatcaga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggtccactccacaaaatgttgcctttcatatccatctggatgttttcagatcaatcaga 500

                                                                       
Query: 301 aatcaagatgagtcccccataggccaacatgacttacataactcatcattaagattcttt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatcaagatgagtcccccataggccaacatgacttacataactcatcattaagattcttt 560

                                                                       
Query: 361 cccctggtgattctaggtagggtcttgttgacagtcaaaatcaaccaacacaaagtctaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cccctggtgattctaggtagggtcttgttgacagtcaaaatcaaccaacacaaagtctaa 620

                                                                       
Query: 421 atattccttttagttccttctaatcattattcagtaaccatgtatgttcatttcctttcc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atattccttttagttccttctaatcattattcagtaaccatgtatgttcatttcctttcc 680

                                                                       
Query: 481 tgttttgatgaaagggaagtttgtttttttctaatagtttggaggcatagagaccatcat 540
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 681 tgttttgatgaaagggaagtttgtttttt-ctaatagtttggaggcatagagaccatcat 739

                              
Query: 541 ggtggaaagctaaaggatg 559
           |||||||||||||||||||
Sbjct: 740 ggtggaaagctaaaggatg 758


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 958
Length adjustment: 10
Effective length of query: 549
Effective length of database: 948
Effective search space:   520452
Effective search space used:   520452
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)