Query= MSMg01no199_e10.b1 MSMg01no199_e10.b1 CHROMAT_FILE:
MSMg01no199_e10.b1 PHD_FILE: MSMg01no199_e10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:19:47 2005
(369 letters)
>mm_chr8_58434028_58434795
Length = 768
Score = 669 bits (346), Expect = 0.0
Identities = 358/362 (98%), Gaps = 1/362 (0%)
Strand = Plus / Plus
Query: 8 gaattcttttgtcgccattttagattttcagtttgttctgtatcaattctctctcattca 67
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattcttttgtggt-attttagattttcagtttgttctgtatcaattctctctcattca 266
Query: 68 aagaatatgatagtgaggtagatgaagctgcctaagccacaggaagaaacatcttcagtc 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aagaatatgatagtgaggtagatgaagctgcctaagccacaggaagaaacatcttcagtc 326
Query: 128 tgtcgtaaatgcacttcagatacagcaccttgcactgcacataaaaattcatagtcacct 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tgtcgtaaatgcacttcagatacagcaccttgcactgcacataaaaattcatagtcacct 386
Query: 188 aagtgggaatagctatgaaaatctgagtatcgccatgctgttgactcagtgctatttata 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 aagtgggaatagctatgaaaatctgagtatcgccatgctgttgactcagtgctatttata 446
Query: 248 aaactcatttttaatgtttccaatttaaattctctgcacatatctctcctgcactaaaga 307
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 aaactcagttttaatgtttccaatttaaattctctgcacatatctctcctgcactaaaga 506
Query: 308 cttgagataccagtgctttaccctaaaatatcttgcttttatatcttgactcttatgttg 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 cttgagataccagtgctttaccctaaaatatcttgcttttatatcttgactcttatgttg 566
Query: 368 ag 369
||
Sbjct: 567 ag 568
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 768
Length adjustment: 9
Effective length of query: 360
Effective length of database: 759
Effective search space: 273240
Effective search space used: 273240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no199_e10.g1 MSMg01no199_e10.g1 CHROMAT_FILE:
MSMg01no199_e10.g1 PHD_FILE: MSMg01no199_e10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:19:47 2005
(330 letters)
>mm_chr8_58540880_58541609
Length = 730
Score = 557 bits (288), Expect = e-163
Identities = 315/330 (95%), Gaps = 11/330 (3%)
Strand = Plus / Minus
Query: 1 ttttaaaggtaatttacactgacacatgcatcttctactgtgtagagaaagaaattttca 60
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 327 ttttaaaggtgatttacactgacacatgcatcttctactgtgtagagaaagaaattctca 268
Query: 61 tgttgagagaaactaaaactgtgcaaatgaaaatttctccaggttaagaatgttatttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tgttgagagaaactaaaactgtgcaaatgaaaatttctccaggttaagaatgttatttaa 208
Query: 121 gcacactgaacacaggaacagtggagcagctgagaaatcatccttctggtctgacatctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gcacactgaacacaggaacagtggagcagctgagaaatcatccttctggtctgacatctg 148
Query: 181 cactttcgagctgagattgtttcacagcccactgtgcacaggtcctgttccactgtgcac 240
|||||||| ||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 147 cactttcgtgctgagattgtttcacagcccactgtgcacaggtc-----ccac------c 99
Query: 241 aggagaaacctgttctcccaggagagccttcacttctgagctcagaggtgagagagacac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 aggagaaacctgttctcccaggagagccttcacttctgagctcagaggtgagagagacac 39
Query: 301 tttctcttcaataactatctgaagcacggc 330
||||||| ||||||||||||||||||||||
Sbjct: 38 tttctctccaataactatctgaagcacggc 9
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 730
Length adjustment: 9
Effective length of query: 321
Effective length of database: 721
Effective search space: 231441
Effective search space used: 231441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
