Query= MSMg01no201_i10.b1 MSMg01no201_i10.b1 CHROMAT_FILE:
MSMg01no201_i10.b1 PHD_FILE: MSMg01no201_i10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:21:46 2005
(596 letters)
>mm_chr8_59136290_59137287
Length = 998
Score = 1025 bits (530), Expect = 0.0
Identities = 576/598 (96%), Gaps = 13/598 (2%)
Strand = Plus / Minus
Query: 1 gtcctttccctagacactccacttgtaaaattcatccatcaaatgcctgaatgtttctta 60
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 622 gtcctttccctagacactccacttgtaaaattcataaatcaaatgcctgaatgtttctta 563
Query: 61 cctcttccagatgcagctagaaacgttgtcagttggcacaatagcaaaaacgaggatgga 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 catcttccagatgcagctagaaacgttgtcagttggcacaatagcaaaaacgaggatgga 503
Query: 121 gttttaaagc--tatccaagtttaaataccatctctaaaataactgagcacatgagtttg 178
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gttttaaagctatatccaagtttaaataccatctctaaaataactgagcacatgagtttg 443
Query: 179 gagtggatttagaaactatagaattagcaaaatccagtgtcactgtgggaaaaacaacaa 238
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 442 gagtggatttagaaactatagaattagcaaaatccagtgtcactgtgggaaaaaaaacaa 383
Query: 239 aacaatataaacaaaaacaagaaaacaaaactcagaagcaaacctagaactttagtatct 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 aacaatataaacaaaaacaagaaaacaaaactcagaagcaaacctagaactttagtatct 323
Query: 299 tattctcgtttctctcccctgaaatataatttgaaactttaatagttgttaagcactcta 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tattctcgtttctctcccctgaaatataatttgaaactttaatagttgttaagcactcta 263
Query: 359 aacaatctcaccctcttgcttggtttgatattaaaggaatactcttgataataattgtta 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aacaatctcaccctcttgcttggtttgatattaaaggaatactcttgataataattgtta 203
Query: 419 ttcatgcttttaaaataatattgacaataaagtcttaattaaatcatttttcttctctgc 478
||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 202 ---------ttaaaataatattgacaataaagtc--aattaaatcatttttcttctctgc 154
Query: 479 taattaagagatgctggtgtattgaaatttgtaagaattatgctaattcaagttattcat 538
||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 153 taattaaaagatgctggtgtattgaaatttgtaagaattatgctaattcaagttgttcat 94
Query: 539 aaatttttgggccttggcattctttttgaatgatttatccttttcctttatgtgtact 596
||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||
Sbjct: 93 aaatttttgggccttggcattctttttgaatgattcatccttttcgtttatgtatact 36
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 998
Length adjustment: 10
Effective length of query: 586
Effective length of database: 988
Effective search space: 578968
Effective search space used: 578968
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no201_i10.g1 MSMg01no201_i10.g1 CHROMAT_FILE:
MSMg01no201_i10.g1 PHD_FILE: MSMg01no201_i10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:21:47 2005
(276 letters)
>mm_chr8_59097414_59098092
Length = 679
Score = 466 bits (241), Expect = e-136
Identities = 266/276 (96%), Gaps = 3/276 (1%)
Strand = Plus / Plus
Query: 1 cgcatatggntatttaaagtgacataagcctttactttcctttgaaattaagtgccctgg 60
||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 201 cgcatatggttatttaaagtgacataagtctttactttcctttgaaattaagtgttctgg 260
Query: 61 cacatggcataagccatacctgatgccaatatttaagcatagcgtcagaaactctgatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 cacatggcataagccatacctgatgccaatatttaagcatagcgtcagaaactctgaaca 320
Query: 121 ataagaatcacgtaagcacacttggattattctttatgattaaggaaggggtccctttaa 180
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ataagaatcacttacgcacacttggattattctttatgattaaggaaggggtccctttaa 380
Query: 181 ctttggttgcattggtctttgaggtatttcctcttttagcatctctg---acattccaga 237
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 ctttggttgcattggtctttgaggtatttcctcttttagcatctctggtgacattccaga 440
Query: 238 gagctaagcctggggatggtgtgtgtgtgtgtgtgt 273
||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagctaagcctggggatggtgtgtgtgtgtgtgtgt 476
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 276
Length of database: 679
Length adjustment: 9
Effective length of query: 267
Effective length of database: 670
Effective search space: 178890
Effective search space used: 178890
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
