Query= MSMg01no204_a05.b1 MSMg01no204_a05.b1 CHROMAT_FILE:
MSMg01no204_a05.b1 PHD_FILE: MSMg01no204_a05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:25:24 2005
(648 letters)
>mm_chr8_61341982_61343030
Length = 1049
Score = 1232 bits (637), Expect = 0.0
Identities = 643/645 (99%), Gaps = 1/645 (0%)
Strand = Plus / Minus
Query: 5 gaattccatgtacg-aaaaaaaaatgcctagaatgttgaactgatggattggacccaaac 63
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 gaattccatgtacgaaaaaaaaaatgcctagaatgttgaactgatggattggacccaaac 790
Query: 64 aatcttggctttaagtccctgaaaacccataaggaatggactgataaaattcaacaatag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 aatcttggctttaagtccctgaaaacccataaggaatggactgataaaattcaacaatag 730
Query: 124 gcagagacccatttaggaaatttaagagttagccagagaacaccagtgttgggcacagtc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 gcagagacccatttaggaaatttaagagttagccagagaacaccagtgttgggcacagtc 670
Query: 184 aattcactggagtgtgtggaacatagttgctatcatcaaaatgagaagggaaaacttaga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 aattcactggagtgtgtggaacatagttgctatcatcaaaatgagaagggaaaacttaga 610
Query: 244 ggactaacggtgcaattatgaggaatgaagctagaatgtccagctgtgtaaggtgcagaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 ggactaacggtgcaattatgaggaatgaagctagaatgtccagctgtgtaaggtgcagaa 550
Query: 304 gtagaaacacaatatttggtgagattttcttttggcagttgatgataaggcaggcttatt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 gtagaaacacaatatttggtgagattttcttttggcagttgatgataaggcaggcttatt 490
Query: 364 tctacaatattctgactaaaattagaaaggaactgcttatagggatacttttagttttag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 tctacaatattctgactaaaattagaaaggaactgcttatagggatacttttagttttag 430
Query: 424 aagaagcagcagacacttcccagtgcgaatggtctttgaaaaagaaggagcaagggacac 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 aagaagcagcagacacttcccagtgcgaatggtctttgaaaaagaaggagcaagggacac 370
Query: 484 ctccaattgtttgtacaacatatctatgttccatgacctcattgctcttgggcctgactt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ctccaattgtttgtacaacatatctatgttccatgacctcattgctcttgggcctgactt 310
Query: 544 aacccactgaataacagctaccaaaaggcacaatggccgagtcaatgacgtgagcagagg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 aacccactgaataacagctaccaaaaggcacaatggccgagtcaatgacgtgagcagagg 250
Query: 604 agcataggccacacaatactatctgctctcttctcgttacctggt 648
||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 249 agcatagaccacacaatactatctgctctcttctcgttacctggt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1049
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1039
Effective search space: 662882
Effective search space used: 662882
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no204_a05.g1 MSMg01no204_a05.g1 CHROMAT_FILE:
MSMg01no204_a05.g1 PHD_FILE: MSMg01no204_a05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:25:24 2005
(645 letters)
>mm_chr8_61201746_61202790
Length = 1045
Score = 1220 bits (631), Expect = 0.0
Identities = 643/647 (99%), Gaps = 2/647 (0%)
Strand = Plus / Plus
Query: 1 ttaacaaggaggcaggaagtggagttataattctgatatcccttaatattttcatgatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 ttaacaaggaggcaggaagtggagttataattctgatatcccttaatattttcatgatgg 258
Query: 61 attggaaattatagttcctatcacataaggaccatcttaaaactagtttcctctctgaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 attggaaattatagttcctatcacataaggaccatcttaaaactagtttcctctctgaaa 318
Query: 121 aa-atttccttaatccccttgtcagactactgttgaattccaagattagactttatctat 179
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 aagatttccttaatccccttgtcagactactgttgaattccaagattagactttatctat 378
Query: 180 gtcaacagctacaacgaggcattttaaaaagtatcattttcacatgcacagatttcattt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gtcaacagctacaacgaggcattttaaaaagtatcattttcacatgcacagatttcattt 438
Query: 240 ttccaccacaatatttaataatgagagatactgatgacggtttcctgttttcaaatgcca 299
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 439 ttccaccacaatatttaataatgagagatactgatgatggtttcctgttttcaaatgcca 498
Query: 300 taatatatagtttttttttt-aatttatagtttatgaacagaacagtttagtggttggac 358
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 499 taatatatagttttttttttaaatttatagtttatgaacagaacagtttagtggttggac 558
Query: 359 atgtattcagaaggacttaatgtctatttaatttagaaattggataaggaagaatattat 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 atgtattcagaaggacttaatgtctatttaatttagaaattggataaggaagaatattat 618
Query: 419 catagacaagaaatagcgactaagccagactgtagttgcgcacgcctttaatcccagcac 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 catagacaagaaatagcgactaagccagactgtagttgcgcacgcctttaatcccagcac 678
Query: 479 ttgggaggcagaggcaggtggatttcgtagttccaggccagcctagtctacagagtgaat 538
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 679 ttgggaggcagaggcaggtggattttgtagttccaggccagcctagtctacagagtgaat 738
Query: 539 tccaggacagccaaggctacaccgagaaaccatgtcttgaaaacaaacaacaaacaaaga 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 tccaggacagccaaggctacaccgagaaaccatgtcttgaaaacaaacaacaaacaaaga 798
Query: 599 agaaaagatcaaaaaaacaaagaaatagtgactaataataaatgcat 645
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 agaaaagatcaaaaaaacaaagaaatagtgactaataataaatgcat 845
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space: 657225
Effective search space used: 657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
