Query= MSMg01no207_b24.b1 MSMg01no207_b24.b1 CHROMAT_FILE:
MSMg01no207_b24.b1 PHD_FILE: MSMg01no207_b24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:29:39 2005
(245 letters)
>mm_chr8_111202006_111202651
Length = 646
Score = 395 bits (204), Expect = e-114
Identities = 222/228 (97%), Gaps = 1/228 (0%)
Strand = Plus / Minus
Query: 16 gaattcatataaccaatgaagttc-aaccattgtcgggtaggtcttggaagttcaaggta 74
||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 443 gaattcatataaccaatgaggttcaaaccattgtcgggtaggtcttggaagttcaaggta 384
Query: 75 atcaaatgtataggctcagaagatcagggagactgagacagaggcagtactatctggagg 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 atcaaatgtataggctcagaagatcagggagactgagacagaggcagtactatctggagg 324
Query: 135 agctacttgtaccaaatgaaggcgacccttcttccctctatagtaatatccaggcagata 194
|||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 323 agctacttgtaccaaatgaaagtgacccttcttccctctatagtaatatccaggcagata 264
Query: 195 gtgactggatagccttaacaccatgggtgttaggggttgggggtgagg 242
||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 263 gtgactggagagccttgacaccatgggtgttaggggttgggggtgagg 216
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 646
Length adjustment: 9
Effective length of query: 236
Effective length of database: 637
Effective search space: 150332
Effective search space used: 150332
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no207_b24.g1 MSMg01no207_b24.g1 CHROMAT_FILE:
MSMg01no207_b24.g1 PHD_FILE: MSMg01no207_b24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:29:39 2005
(603 letters)
>mm_chr8_111130063_111131065
Length = 1003
Score = 1094 bits (566), Expect = 0.0
Identities = 593/602 (98%)
Strand = Plus / Plus
Query: 2 gaaaagcaagcaggcccaagagagatgttggctggagaatacttaatggaggtgagacat 61
||||||||||| ||||||||||||||||||||| ||||| || |||||||||||||||||
Sbjct: 202 gaaaagcaagcgggcccaagagagatgttggctagagaagacgtaatggaggtgagacat 261
Query: 62 cccttcggctaaaccgaacggatctggagaagaaagctgctgagactgtatctgagcttt 121
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ccctttggctaaaccgaacggatctggagaagaaagctgctgagactgtatctgagcttt 321
Query: 122 ttcctgtttacatgtgaattaagatgacgaccgttggtacggcagagttggaccaaatca 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ttcctgtttacatgtgaattaagatgacgaccgttggtacggcagagttggaccaaatca 381
Query: 182 gccttgcaagaccctagaaggctggcaaagagattggtgctttgtagagcatgagggctt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gccttgcaagaccctagaaggctggcaaagagattggtgctttgtagagcatgagggctt 441
Query: 242 ctgggaacctctgaacaggggcaaagtgggcaggagccagggatacagaagacgactctg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 442 ctgggaacctctgaacaggggcaaagtgggcaggagccagggatacagaagacaactctg 501
Query: 302 gtagaaaggcacagtgagcaggttttttttaatgagatagcagcggggcaggaaccaaga 361
|||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct: 502 gtagaaaggcacagtgagcagggtttttttaatgagatagcagcagggcaggaaccaaga 561
Query: 362 gaactaaatgatcttgaagattagagataaagaaaccaattggaggatctaggatcagta 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gaactaaatgatcttgaagattagagataaagaaaccaattggaggatctaggatcagta 621
Query: 422 ccccctcgacaataagactgccttgacaaaattcctactttagttaaaaggccaaagcaa 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ccccctcgacaataagactgccttgacaaaattcctactttagttaaaaggccaaagcaa 681
Query: 482 tcctgtcgccctttctttctttgcattcttgataagacagatactgacttgaaagaagca 541
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tcctgttgccctttctttctttgcattcttgataagacagatactgacttgaaagaagca 741
Query: 542 attagggagggagattatcatagcagccatgagggacgagcagatagaagactggattca 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 attagggagggagattatcatagcagccatgagggacgagcagatagaagactggattca 801
Query: 602 gc 603
||
Sbjct: 802 gc 803
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1003
Length adjustment: 10
Effective length of query: 593
Effective length of database: 993
Effective search space: 588849
Effective search space used: 588849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
