TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTAATAAAGGTTCAGGAATTAGTAGTATAGGACCCCAATCTCTT
TTCTATCTGAGAGGTTGCTTACTGAGAAGGGGCATGTGACCTGAACAAAC
CATCAATTCTGGAAACTTCCTGCAAAGAAAGAATTGTGGCCCAGTTAGAC
CGGGTAGGAGGAGGTGGAGGGGGTCCCGTTGACTAGGAAGGAGTAGCAAG
AGACCTAAGGGATGTTAGTTGGCTGAAAGTAGGCACCAGCGAGCTTTGAT
TAGGGTAGCCTGTCATTTGTTAGGAGAGTAGGGAAGAACTGAGTCTCGTG
AAGGATATTTTTTATGCCCCCCCCCCTGATATTTAACTGAACTGAAAGTA
GTGGAGCAATCCTCCCCCCCAAACAAAGACATACATCAGGGATAGAAGGA
GCTGATGGGGTGCTACAGGAAAGACAGACAGAGGTATTACAGTATAAATA
TACGAAAGTTTGGACATGAGGAGTGATTTCTCATTTCTTCTATTCCTCAC
AGTATTCTATAGGTTTTGACTTATACTGTGATCCATCGCTCTATTTTCGG
TGCCATTTTTCTAAATTTCCTCTTTTATAATGAAAGCATTGTCTATCATT
CTCTCCCCTTGAGGCTCCTGTGACGGTCTCACTTTTCTTGTTGTCTGGGT
CATTTTCCCTTTCCTCCTATTGTTTGAAATATTGTN

NCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCATGTGTATGGGATGTTGTTTGAGAC
CTGAATAAGGTGTGAGATTACCTGAAGCTAGAGTGACAGGTAGTTAAGAG
CCGTCCTGTATGGGTTCCAGGAATCAAACGCAGGATGTCTACAAGAATAA
GAAGCATTTACCAGAAAAAAGCAAACAACCCAATTAAAAAATGGGGTATA
GAACTAAACGAAGAATTTACAACTGAGGAATATTGAATGGCTGAGATGCA
CCAAAAGAAATGTTCAAAGTCCTTACTGATCAGATAAATGCAAATTAAAA
CGACCCTAATATTCCACTTCACACCAACCAGAAGGGATAAGATCAAAACC
TCAGGTGACAACATATGTTGCAGAGGATGTGGAGAAAGCAGAACACTCCT
CCATTGCTGGTGGGATTGAAAACTGGTAAACCACTATGGAAATCCATCTG
GAGGTTCCTCAGAAAATTGGAAATTGATCTACTTGAAGACACAGCTATAC
CACTCTTGGGCATATACCCAAAAGATGCCCCACCATGCTACAGGGTGTTC
ATAGCGGCCTTATTTGTGATAGCCAGAAACTGGAAACAACACAAGATGTC
CCACAACAGAAGAATGGATACAGATAATGTGGTTCATTTACACAGTGGAG
TACTACTCAGCAACATCCTGACTTTTG

Query= MSMg01no209_a17.g1 MSMg01no209_a17.g1 CHROMAT_FILE:
MSMg01no209_a17.g1 PHD_FILE: MSMg01no209_a17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:33:03 2005
         (563 letters)



>mm_chr8_61987400_61988362
          Length = 963

 Score = 1004 bits (519), Expect = 0.0
 Identities = 552/563 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   catgtgtatgggatgttgtttgagacctgaataaggtgtgagattacctgaagctagagt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catgtgtatgggatgttgtttgagacctgaataaggtgtgagattacctgaagctagagt 260

                                                                       
Query: 61  gacaggtagttaagagccgtcctgtatgggttccaggaatcaaacgcaggatgtctacaa 120
           ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 261 gacaggtagttaagagccgtcctgtatgggttccaggaatcaaactcaggatgtctccaa 320

                                                                       
Query: 121 gaataagaagcatttaccagaaaaaagcaaacaacccaattaaaaaatggggtatagaac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaataagaagcatttaccagaaaaaagcaaacaacccaattaaaaaatggggtatagaac 380

                                                                       
Query: 181 taaacgaagaatttacaactgaggaatattgaatggctgagatgcaccaaaagaaatgtt 240
           ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 381 taaacaaagaatttacaactgaggaatattgaatggctgagatgcacccaaagaaatgtt 440

                                                                       
Query: 241 caaagtccttactgatcagataaatgcaaattaaaacgaccctaatattccacttcacac 300
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 441 caaagtccttactgatcagataaatgcaaattaaaacgaccctaagattccacttcacac 500

                                                                       
Query: 301 caaccagaagggataagatcaaaacctcaggtgacaacatatgttgcagaggatgtggag 360
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caaccagaagggctaagatcaaaacctcaggtgacaacatatgttgcagaggatgtggag 560

                                                                       
Query: 361 aaagcagaacactcctccattgctggtgggattgaaaactggtaaaccactatggaaatc 420
           |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaagcagaacactcctccgtttctggtgggattgaaaactggtaaaccactatggaaatc 620

                                                                       
Query: 421 catctggaggttcctcagaaaattggaaattgatctacttgaagacacagctataccact 480
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 621 catctggaggttcctcagaaaattggaaattgatctacctgaagacacagctataccact 680

                                                                       
Query: 481 cttgggcatatacccaaaagatgccccaccatgctacagggtgttcatagcggccttatt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cttgggcatatacccaaaagatgccccaccatgctacagggtgttcatagcggccttatt 740

                                  
Query: 541 tgtgatagccagaaactggaaac 563
           ||||| |||||||||||| ||||
Sbjct: 741 tgtgacagccagaaactgaaaac 763


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 963
Length adjustment: 10
Effective length of query: 553
Effective length of database: 953
Effective search space:   527009
Effective search space used:   527009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)