Query= MSMg01no211_p22.b1 MSMg01no211_p22.b1 CHROMAT_FILE:
MSMg01no211_p22.b1 PHD_FILE: MSMg01no211_p22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:37:38 2005
(324 letters)
>mm_chr8_98978336_98979059
Length = 724
Score = 588 bits (304), Expect = e-172
Identities = 318/324 (98%), Gaps = 3/324 (0%)
Strand = Plus / Plus
Query: 4 ggaattcttat---gtttaagtgcgaactagtgaaaggctccatttgaggaaggaaggat 60
||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 201 ggaattcttattatgtttaagtgcgaactagtgaaaggctccatttgaggaaggaaagat 260
Query: 61 gaattatgctgcaaatatccttaaacacaggaacatggagagttttatacaatagtttgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaattatgctgcaaatatccttaaacacaggaacatggagagttttatacaatagtttgg 320
Query: 121 tcatcttagtagtttttaaagagtaaggtgaggcttaaaaactgtctgctagaggccgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcatcttagtagtttttaaagagtaaggtgaggcttaaaaactgtctgctagaggccgat 380
Query: 181 tctaaggtcaagatacaaaaaggtagtaaatgaggtatatagggactctcccaggaatgg 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 tctaaggtcaagatacaaaaaggtagtaaatgaggtagatagggactctcccaggaatgg 440
Query: 241 cattttcttcctaaatgtaaaggaggtattgtgcccagaaaagaaaagccctgccagttg 300
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cgttttcttcctaaatgtaaaggaggtattgtgcccagaaaagaaaagccctgccagttg 500
Query: 301 cttttgcaacagcaagtgaaatct 324
||||||||||||||||||||||||
Sbjct: 501 cttttgcaacagcaagtgaaatct 524
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no211_p22.g1 MSMg01no211_p22.g1 CHROMAT_FILE:
MSMg01no211_p22.g1 PHD_FILE: MSMg01no211_p22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:37:38 2005
(289 letters)
>mm_chr8_99078297_99078985
Length = 689
Score = 542 bits (280), Expect = e-158
Identities = 286/288 (99%)
Strand = Plus / Minus
Query: 1 actttgtagaccaggctgtccttgaactcagaaatccacctgcctctgacccccaagtgc 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 582 actttgtagaccaggctgtccttgaactcagaaatccacctgcctctgactcccaagtgc 523
Query: 61 tgggattaaaggtgtgtgccagcactgcccagcttgtaattttttaaatgtatactctat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 tgggattaaaggtgtgtgccagcactgcccagcttgtaattttttaaatgtatactctat 463
Query: 121 gacctaaatagcgtatcttacatagctttagaataactccttcaggtgggcactattttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 gacctaaatagcgtatcttacatagctttagaataactccttcaggtgggcactattttc 403
Query: 181 ccatcctgattttattcactaaaaagtacaaacttaaggagatcaaagtggacaccccaa 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ccatcctgattttattcactgaaaagtacaaacttaaggagatcaaagtggacaccccaa 343
Query: 241 agttacaaagcacataacttataggaaggtacacagaaaattcttgtg 288
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 agttacaaagcacataacttataggaaggtacacagaaaattcttgtg 295
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
