Query= MSMg01no213_o21.b1 MSMg01no213_o21.b1 CHROMAT_FILE:
MSMg01no213_o21.b1 PHD_FILE: MSMg01no213_o21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:40:06 2005
(334 letters)
>mm_chr8_123825981_123826712
Length = 732
Score = 557 bits (288), Expect = e-163
Identities = 316/326 (96%), Gaps = 2/326 (0%)
Strand = Plus / Minus
Query: 6 gaattcactttgtccgtctactttgcttcctgacaagccagagctccagttgcattctga 65
||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 529 gaattcactttgtccgtttactttgcttactgacaagccagagctccagttgcaatctga 470
Query: 66 tttccagccctgacttcagggcatttttaactagaagcaaaagacagatgagggagccca 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 tttccagccctgacttcagggcatttttaactagaagcaaaagacagatgagggagccca 410
Query: 126 gacccctgctgtggaactccgtgtgaactcaccctagtgggctggggtcaaactctgggc 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 gacccctgctgtggaactccgtgtgaactcaccctagtgggctggggtcaaactctgggc 350
Query: 186 agtggattggctcattaaactaatgacctaatttantgcttaaaacacttgaaatttact 245
|||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||
Sbjct: 349 agtggattggctcattaaacaaatgacctaatttagtgcttaagacacttgaaatttact 290
Query: 246 gtactaatttgtcaagtcgtccagaacagcccatccaccaatggagatcccagttggttt 305
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 289 gtactaatttgtcaagtcgtccagaacagcccagccaccaatggagatcccagttggttt 230
Query: 306 ttagtggaattatggggcnaaattca 331
| |||||||||||||| | |||||||
Sbjct: 229 t-agtggaattatggg-caaaattca 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 732
Length adjustment: 9
Effective length of query: 325
Effective length of database: 723
Effective search space: 234975
Effective search space used: 234975
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no213_o21.g1 MSMg01no213_o21.g1 CHROMAT_FILE:
MSMg01no213_o21.g1 PHD_FILE: MSMg01no213_o21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:40:06 2005
(280 letters)
>mm_chr8_123735635_123736314
Length = 680
Score = 511 bits (264), Expect = e-149
Identities = 276/280 (98%)
Strand = Plus / Plus
Query: 1 atcagaattcaagtcacaagagtcattagtctttgctcctcattaatattcatctagctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcagaattcaagtcacaagagtcattagtctttgctcctcattaatattcatctagctc 260
Query: 61 atctgcacatagaaaccatggtgctgctagtcctgcctgacactgcccagggtgggctgt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 atctgcacatagaaaccatggtgctgctagtcctgcctgacactgcccagggcgggctgt 320
Query: 121 gtacctgaagcacagtgagtaccctcctctctcgtcttggtggagagggatggatgggtg 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtacctgaagcacagtgggtaccctcctctctcgtcttggtggagagggatggatgggtg 380
Query: 181 gacagttgctggtcctgagtcccagtgggacagcatggtgtggagggatgtgtccctgtg 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacagttgcaggtcctgagtcccagtgggacagcatggtgtggagggatgtgtccctgtg 440
Query: 241 gccaggatcaggggaactgcctaagggtgctcagagtagg 280
||||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 gccaggatcaggggaactgtctaagggtgctcagagtagg 480
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 680
Length adjustment: 9
Effective length of query: 271
Effective length of database: 671
Effective search space: 181841
Effective search space used: 181841
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
