Query= MSMg01no216_i19.b1 MSMg01no216_i19.b1 CHROMAT_FILE:
MSMg01no216_i19.b1 PHD_FILE: MSMg01no216_i19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:43:35 2005
(692 letters)
>mm_chr8_62007171_62008261
Length = 1091
Score = 928 bits (480), Expect = 0.0
Identities = 528/544 (97%), Gaps = 4/544 (0%)
Strand = Plus / Minus
Query: 5 gaattctgacagaaaatccc-gacctctgcaaccttttttattaaggatgctttggaact 63
|||||||||||||||| ||| |||||||| ||||||||||||||||||||| | ||||||
Sbjct: 738 gaattctgacagaaaa-ccctgacctctgaaaccttttttattaaggatgc-tcggaact 681
Query: 64 gtttcttcccattatattaaattaggatttttccttcttcaaatatcataatgccatgat 123
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gtttcttcccattacattaaattaggatttttccttcttcaaatatcataatgccatgat 621
Query: 124 gcctagcagtaaagatcccattctatgctcaaaggattcataacttcaaacaaatcctaa 183
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 620 gcctagcagtaaagatcccattctatgctcaaaagattcataacttcaaacaaatcctaa 561
Query: 184 acaaaacaacaggaaatgtagtgtcaagggtacagtatgtgagcttatgagaagagaatt 243
|||||||||||||||||||||||||||||||||||||||||||| || || |||||||||
Sbjct: 560 acaaaacaacaggaaatgtagtgtcaagggtacagtatgtgagcctacgaaaagagaatt 501
Query: 244 cattaaagttctttgctgcctttttgaaaccatcctagaaatcatggaggctctcaaggg 303
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cattaaagttctttgctacctttttgaaaccatcctagaaatcatggaggctctcaaggg 441
Query: 304 acatagttttttctgttggttcatacaacaatttaatttgctttccttcaaacagaaatg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 acatagttttttctgttggttcatacaacaatttaatttgctttccttcaaacagaaatg 381
Query: 364 gaaagaactgaagggccaaatagtaatacttgttgagattccaaaacaaatattaaatta 423
|||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 380 gaaagaactgaagggctaaatagtaatatttgttgagattccaaaacaaatattaaatta 321
Query: 424 aataacttatttgcttcaaaacctaaattcaataccacttttgtctttgaaacatgtgga 483
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 320 aataacttatttgcttcaaaacctaaattcaataccacttttgtatttgaaacatgtgga 261
Query: 484 tgagttccttataaagataaaagtccctccaagtcagacaaactctatatatcatattta 543
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 260 tgagttccttataaagataaaagtccctccaagtcagacaaactctatacatcatattt- 202
Query: 544 tttt 547
||||
Sbjct: 201 tttt 198
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 692
Length of database: 1091
Length adjustment: 10
Effective length of query: 682
Effective length of database: 1081
Effective search space: 737242
Effective search space used: 737242
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no216_i19.g1 MSMg01no216_i19.g1 CHROMAT_FILE:
MSMg01no216_i19.g1 PHD_FILE: MSMg01no216_i19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:43:35 2005
(664 letters)
>mm_chr8_61856614_61857677
Length = 1064
Score = 1222 bits (632), Expect = 0.0
Identities = 656/664 (98%)
Strand = Plus / Plus
Query: 1 aaagcttaatcacacatagaaaggataagttttcaaggacaaaaaccatgaccataacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 aaagcttaatcacacatagaaaggataagttttcaaggacaaaaaccatgaaaataacag 260
Query: 61 agctgtgttaacatagttgtatttatgcattgtaattttacactgtaccacctaaatgca 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 261 agctgtgttaacatagttgtatttatgcattgtaatattacactgtaccacctaaatgca 320
Query: 121 tgcaattatatgttaattcaggtaaatgaaaaaaaattaaagaataaaatctcttccaga 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcaattatctgttaattcaggtaaatgaaaaaaaattaaagaataaaatctcttccaga 380
Query: 181 aagccattcatttgtcagagtcccaacgttgcctaaataaaatttaattcaatgatatac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagccattcatttgtcagagtcccaacgttgcctaaataaaatttaattcaatgatatac 440
Query: 241 ataattttgttaaattggatagtaacatttcttccttggtttaatttacatttacttgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataattttgttaaattggatagtaacatttcttccttggtttaatttacatttacttgca 500
Query: 301 atatttttatgttaataacttaaaactggacctaaatatgaaataacattcttattctag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atatttttatgttaataacttaaaactggacctaaatatgaaataacattcttattctag 560
Query: 361 atgatattatcatttatagaaaagaaataaaattgagaattcacatataaaatggctact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgatattatcatttatagaaaagaaataaaattgagaattcacatataaaatggctact 620
Query: 421 ttctaacggacctcaaacttgtgtgtaagcttggggtgttagtgcatctctgtaaatact 480
||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 621 ttctaactgacctcaaatttgtgtgtaagcttggggtgttagtgtatctctgtaaatact 680
Query: 481 gcactgggcacccacagagctaaggcaagagaaataagaatttgaggtcaacctacccat 540
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gcactgggcacccacagaactaaggcaagagaaataagaatttgaggtcaacctacccat 740
Query: 541 ctcaaaatttttaacccagaactgttgctgtccaaaggaaagacagggacaaaaacatgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctcaaaatttttaacccagaactgttgctgtccaaaggaaagacagggacaaaaacatgg 800
Query: 601 agcagggactgaaggaaagggaattcagagagtgccccacctgggaatccatcccacctg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 agcagggactgaaggaaagggaattcagagagtgccccacctgggaatccatcccacctg 860
Query: 661 taga 664
||||
Sbjct: 861 taga 864
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space: 689316
Effective search space used: 689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
