Query= MSMg01no216_m17.b1 MSMg01no216_m17.b1 CHROMAT_FILE:
MSMg01no216_m17.b1 PHD_FILE: MSMg01no216_m17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:43:56 2005
(577 letters)
>mm_chr8_35704030_35705006
Length = 977
Score = 1035 bits (535), Expect = 0.0
Identities = 561/577 (97%), Gaps = 12/577 (2%)
Strand = Plus / Minus
Query: 1 ccagaccaataaatattaaaatgttttctctcatatgtggaatctagccttctagctctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955 ccagaccaataaatattaaaatgttttctctcatatgtggaatctagccttctagctctt 896
Query: 61 tatgcatcagcctatatatgtattgatgtttctatctatctatctatctatctatctatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 tatgcatcagcctatatatgtattgatgtttctatctatctatctatctatctatctatc 836
Query: 121 tatctatctatctatctatctatctatctatctatctgtctgtctgtctgtctgtctgtc 180
|||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 835 tatctatctatctatctatctatctatctatcta------------tctatctgtctgtc 788
Query: 181 tgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtttgtccgtccgtctttc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 787 tgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtttgtccgtccgtccatc 728
Query: 241 tatcctatccgtctgtctatctgtctgtctatctatctatctatctatctatctatctat 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 tatcctatctgtctgtctatctgtctgtctatctatctatctatctatctatctatctat 668
Query: 301 ctatctatctatctatctatctatctatctgatatgaaagtggcagagggactttatggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 ctatctatctatctatctatctatctatctgatatgaaagtggcagagggactttatggg 608
Query: 361 gaaaagaaatggacaagtggaagtggggacaatggactgagaagggtcacagggaagcgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 gaaaagaaatggacaagtggaagtggggacaatggactgagaagggtcacagggaagcgc 548
Query: 421 atattagcacagtacaatatatagacacatatacacatacatacatttatattctatttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 atattagcacagtacaatatatagacacatatacacatacatacatttatattctatttt 488
Query: 481 catatatatatatacacatacatacattatgaaaatatcacagtgaaccaattattttat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 catatatatatatacacatacatacattatgaaaatatcacagtgaaccaattattttat 428
Query: 541 atgtcagttaaaacacaattaattggggctggagaga 577
|||||||||||||||||||||||||||||||||||||
Sbjct: 427 atgtcagttaaaacacaattaattggggctggagaga 391
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 204
Number of extensions: 73
Number of successful extensions: 73
Number of sequences better than 10.0: 1
Number of HSP's gapped: 63
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 977
Length adjustment: 10
Effective length of query: 567
Effective length of database: 967
Effective search space: 548289
Effective search space used: 548289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no216_m17.g1 MSMg01no216_m17.g1 CHROMAT_FILE:
MSMg01no216_m17.g1 PHD_FILE: MSMg01no216_m17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:43:56 2005
(414 letters)
>mm_chr8_35559563_35560376
Length = 814
Score = 793 bits (410), Expect = 0.0
Identities = 413/414 (99%)
Strand = Plus / Plus
Query: 1 cagagacacatgctcaatcccttcaaagatctccagccaatcttcccattgatgagagtc 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 cagagacacatgctcaatcccttcaaagatctccagccaagcttcccattgatgagagtc 260
Query: 61 agaaagatcatcccaagaagttgtaactaaaactcacagtctgcgtctaaaaggaagtag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaaagatcatcccaagaagttgtaactaaaactcacagtctgcgtctaaaaggaagtag 320
Query: 121 gcagaaataccttcaaatggagtagaatattttataaggcaaacacactctgcagagtcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcagaaataccttcaaatggagtagaatattttataaggcaaacacactctgcagagtcc 380
Query: 181 agattcctgttggctgtgagggaagatgcatgactaaatactactcaagtgagacttgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agattcctgttggctgtgagggaagatgcatgactaaatactactcaagtgagacttgga 440
Query: 241 aatgttcatcacgatgcccactctgatccactccgaagtggattcctctggctcagatgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatgttcatcacgatgcccactctgatccactccgaagtggattcctctggctcagatgt 500
Query: 301 gtctttctcaaaggccacttactctaaagtgggtttcctttaagcttgaattccagtacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtctttctcaaaggccacttactctaaagtgggtttcctttaagcttgaattccagtacc 560
Query: 361 ctgtttagttatttcctaacactcatcgtaatgtacttttcctgctggaatttg 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgtttagttatttcctaacactcatcgtaatgtacttttcctgctggaatttg 614
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space: 326025
Effective search space used: 326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
