Query= MSMg01no231_d12.b1 MSMg01no231_d12.b1 CHROMAT_FILE:
MSMg01no231_d12.b1 PHD_FILE: MSMg01no231_d12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:47:27 2005
(320 letters)
>mm_chr8_26572607_26573326
Length = 720
Score = 592 bits (306), Expect = e-173
Identities = 312/314 (99%)
Strand = Plus / Minus
Query: 5 gaattccttactcccctcttaagaaataattcacaatagggtttaaacaaagctagcttc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 gaattccttactcccctcttaagaaataattcacaatagggtttaaacaaagctagcttc 459
Query: 65 ttcagctaaattaaaaacattcttgtactcattcaaaagacgatctgatctctgtgtgtg 124
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 458 ttcagctaaattaaaaacattcttgtactcattcaaaagacgatctgatctgtgtgtgtg 399
Query: 125 tgttttccaaacactcctcacacacaacttttcctgggaacattcactacttcctgagtg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 tgttttccaaacactcctcacacacaacttttcctgggaacattcactacttcctgagtg 339
Query: 185 ctctagcctcaagtcagcctgtaccctttcttactactgggacctccttgagttcactgg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ctctagcctcaagtcagcctgtaccctttcttactactgggacctccttgagttcactgg 279
Query: 245 gggagggggtggtgaaatttaccataagagatgctgttttaagcttacctcctccagagg 304
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 278 gggagggggtggtgaaatttaccataagagatgctgttttaagtttacctcctccagagg 219
Query: 305 agcatcttttacta 318
||||||||||||||
Sbjct: 218 agcatcttttacta 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no231_d12.g1 MSMg01no231_d12.g1 CHROMAT_FILE:
MSMg01no231_d12.g1 PHD_FILE: MSMg01no231_d12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:47:27 2005
(291 letters)
>mm_chr8_26481353_26482043
Length = 691
Score = 487 bits (252), Expect = e-142
Identities = 280/300 (93%), Gaps = 18/300 (6%)
Strand = Plus / Plus
Query: 1 tctctgaagggtgggacatcctgaggtttctggggaaaacaagaagccccgccccttcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 tctctgaagggtgggacatcctgaggtttctggggaaaacaagaagccccgccccttcac 252
Query: 61 acgatcaaacccacagcacagctggtgtgtggttagcctggtgggaggctttggtgtgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 acgatcaaacccacagcacagctggtgtgtggttagcctggtgggaggctttggtgtgca 312
Query: 121 tctctcttgttatcagagcaatcaccatcaaatggtatttttttcccc------------ 168
||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 313 tctctcttgttatcagagcaatcaccatcaaatggtatt-----cccccccccccccccc 367
Query: 169 -gttttgacatacacgtctctcggataggcgggttaagctgggtcgttctgccttagtgt 227
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 cgttttgacatactcatctctcggataggcgggttaagctgggtcgttctgccttagtgt 427
Query: 228 aggaggcttcgtcttcacacccttagtccttcctgcaggtggggtctatcagcctctctt 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 aggaggcttcgtcttcacacccttagtccttcctgcaggtggggtctatcagcctctctt 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
