Query= MSMg01no231_i24.b1 MSMg01no231_i24.b1 CHROMAT_FILE:
MSMg01no231_i24.b1 PHD_FILE: MSMg01no231_i24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:47:53 2005
(287 letters)
>mm_chr8_6284925_6285611
Length = 687
Score = 524 bits (271), Expect = e-153
Identities = 283/287 (98%)
Strand = Plus / Plus
Query: 1 caagtggggatgaagggagggacctttcccttttcttaaactacatctttcaaatttttc 60
|||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 caagtggggaggaagggagggaccttttccttttcttaaactacatctttcaaatttttc 260
Query: 61 attaataaagatatgttgatgataataatatttatgtttagataccaggaaatttaaatc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 261 attaataaagatatgttgatgataataatatttatgtttagataccaggaaatttaaagc 320
Query: 121 tcaatactgatttgaattgtaattttgttgatggctcttttcccataggagattaaatca 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 tcaatactgatttgaattgtaattttgttgatggctcttttcccataagagattaaatca 380
Query: 181 ttacaggactgccctctgtgtggatcttgatacagatgggaattactcagttatcagcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttacaggactgccctctgtgtggatcttgatacagatgggaattactcagttatcagcct 440
Query: 241 aattgttctctccttgaatgtgacctgtttttcctacatgatttaat 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aattgttctctccttgaatgtgacctgtttttcctacatgatttaat 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no231_i24.g1 MSMg01no231_i24.g1 CHROMAT_FILE:
MSMg01no231_i24.g1 PHD_FILE: MSMg01no231_i24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:47:53 2005
(281 letters)
>mm_chr8_6394215_6394894
Length = 680
Score = 520 bits (269), Expect = e-152
Identities = 278/281 (98%), Gaps = 1/281 (0%)
Strand = Plus / Minus
Query: 1 atatcatataggcatctctttctaaatttgattcatgcataaatacaatgatataaattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 atatcatataggcatctctttctaaatttgattcatgcataaatacaatgatataaattg 421
Query: 61 ttgctgaaatagctactttccaagttaatccaggtcttcattgttcctgaagaagctaat 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 420 ttgctgaaatagctactttccaagttaatccaggtcttcattgttcctggagaagctaat 361
Query: 121 atttgtggcagtatatatgtgtcaactgctttctgatgaggtaagcatataatagataaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gtttgtggcagtatatatgtgtcaactgctttctgatgaggtaagcatataatagataaa 301
Query: 181 aaaataaaagcacaatatcacttacgaatactcactaggttaaatgtgtcctgtattact 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 aaa-taaaagcacaatatcacttacgaatactcactaggttaaatgtgtcctgtattact 242
Query: 241 cttgctgaacaaagtaattgaggaagtcactgacttcatga 281
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cttgctgaacaaagtaattgaggaagtcactgacttcatga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 680
Length adjustment: 9
Effective length of query: 272
Effective length of database: 671
Effective search space: 182512
Effective search space used: 182512
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
