Query= MSMg01no235_l17.b1 MSMg01no235_l17.b1 CHROMAT_FILE:
MSMg01no235_l17.b1 PHD_FILE: MSMg01no235_l17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:53:08 2005
(280 letters)
>mm_chr8_112328682_112329361
Length = 680
Score = 499 bits (258), Expect = e-146
Identities = 270/274 (98%)
Strand = Plus / Minus
Query: 7 gaattccaccactataatatacctcagcccatgtaattttatttaatcacgttccagaaa 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gaattccaccactataatatacctcagcccatgtaattttatttaatcacgttccagaaa 388
Query: 67 tgaatcttaactttagatgtatggtgtgtgtgtacacacgtgtccgtacacatatatctt 126
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 387 tgaatcttaactttagatgtatggtgtgtgtgtacacacgtgtccgtacacatgtatctt 328
Query: 127 tttcaaaataaaatctcctcgaaaccttaaatctactctgattttatactcaagagctgt 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 327 tttcaaaataaaatctcctcgaaaccttaaatctactctgattttatactcaagaactgt 268
Query: 187 atcccttaggattcccttaggaatatataacagtggacatgtcctaatggaagggttctc 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 atcccttaggattcccttaggaatatataacagtggacatgtcctaatggaagggttctc 208
Query: 247 tctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 280
| | ||||||||||||||||||||||||||||||
Sbjct: 207 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 174
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 14
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 680
Length adjustment: 9
Effective length of query: 271
Effective length of database: 671
Effective search space: 181841
Effective search space used: 181841
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no235_l17.g1 MSMg01no235_l17.g1 CHROMAT_FILE:
MSMg01no235_l17.g1 PHD_FILE: MSMg01no235_l17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:53:08 2005
(325 letters)
>mm_chr8_112170702_112171428
Length = 727
Score = 592 bits (306), Expect = e-173
Identities = 321/327 (98%), Gaps = 2/327 (0%)
Strand = Plus / Plus
Query: 1 agtaaagtacactctcccttctgtgctgtgggaaacacccatgggggatttcttgggagg 60
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 201 agtaaagtacactctcccttctgtgctgtgggaaagagccatgggggatttcttgggagg 260
Query: 61 ctcacagcatcctggtccctttgatatctttcccctaactcctgtccactgagatgtgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcacagcatcctggtccctttgatatctttcccctaactcctgtccactgagatgtgat 320
Query: 121 cagccttagctttcttccaaggttaggaactgttctagagactgagtggggtggcatgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 cagccttagctttcttccaaggttaggaactgttctagagactgagtggggtggcgtgta 380
Query: 181 ctactccagagctgttttattttttttgatgtctgagcaaactgtccctcttattcagtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctactccagagctgttttattttttttgatgtctgagcaaactgtccctcttattcagtg 440
Query: 241 tctctcatagaagtgattttgaagaggcactgtgggggtgactcttctctganaaaaaaa 300
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 tctctcatagaagtgattttgaagaggcactgtgggggtgactcttctctgaaaaaaaaa 500
Query: 301 aaaaaa--ggaagcattgagtttcttt 325
|||||| |||||||||||||||||||
Sbjct: 501 aaaaaaaaggaagcattgagtttcttt 527
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 727
Length adjustment: 9
Effective length of query: 316
Effective length of database: 718
Effective search space: 226888
Effective search space used: 226888
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
