Query= MSMg01no236_a14.b1 MSMg01no236_a14.b1 CHROMAT_FILE:
MSMg01no236_a14.b1 PHD_FILE: MSMg01no236_a14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:53:30 2005
(335 letters)
>mm_chr8_117249499_117250234
Length = 736
Score = 611 bits (316), Expect = e-179
Identities = 331/336 (98%), Gaps = 1/336 (0%)
Strand = Plus / Minus
Query: 1 catacttcgagtcccttgtatacagtggagattaatattgtagcatgggtacacactgtg 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 536 catacttcgagtcccttgtatacagtggagattaatattgtaggatgggtacacactgtg 477
Query: 61 tgatgtttcaacatccaataaaccatccctccggtagtatcacctaccgcagtgcctgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 tgatgtttcaacatccaataaaccatccctccggtagtatcacctaccgcagtgcctgca 417
Query: 121 gaaatgttgccagaccatgaggaacatgcatc-ttttttttctccaaacaatgcaagcta 179
||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 416 gaaatgttgccagaccacgaggaacatgcatctttttttttctccaaacaatgcaagcta 357
Query: 180 atcttcccaggggcgatctgtcaatgccaggagtgctaatttgatagctccgtcatcaga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 atcttcccaggggcgatctgtcaatgccaggagtgctaatttgatagctccgtcatcaga 297
Query: 240 tggcattgagaatttcattacatattttaagtcacgctaacatggtttgctaatgctgga 299
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 tggcatcgagaatttcattacatattttaagtcacgctaacatggtttgctaatgctgga 237
Query: 300 attcactaataggccacggctatttaaataacaaac 335
||||||||| ||||||||||||||||||||||||||
Sbjct: 236 attcactaaaaggccacggctatttaaataacaaac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 736
Length adjustment: 9
Effective length of query: 326
Effective length of database: 727
Effective search space: 237002
Effective search space used: 237002
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no236_a14.g1 MSMg01no236_a14.g1 CHROMAT_FILE:
MSMg01no236_a14.g1 PHD_FILE: MSMg01no236_a14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:53:30 2005
(349 letters)
>mm_chr8_117104045_117104793
Length = 749
Score = 659 bits (341), Expect = 0.0
Identities = 347/349 (99%)
Strand = Plus / Plus
Query: 1 agaccacagttgaagggccaactgtgacctgccctaactgtccagacagcttggggtcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaccacagttgaagggccaactgtgacctgccctaactgtccagacagcttggggtcta 260
Query: 61 gcaaggagctttatgcttgaaggatgaagggagaggtcaagagaagcatggtctgtgcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcaaggagctttatgcttgaaggatgaagggagaggtcaagagaagcatggtctgtgcta 320
Query: 121 tgtagtcatcatgtggtcatcatgtggtcatcatgtggctgtctcggcttagtgtctttt 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtggtcatcatgtggtcatcatgtggtcatcatgtggctgtctcggcttagtgtctttt 380
Query: 181 cagtagagtgcttctggatctcggcacggcctccgctggcctcctgctatcgctggtgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagtagagtgcttctggatctcggcacggcctccgctggcctcctgctatcgctggtgac 440
Query: 241 ttctgctgatgaccaaaggggtgggcagcagggtctacagcctcgcgtcccccatagcct 300
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 441 ttctgctgatgaccaaaggggtgggcagcagggtctacagcctctcgtcccccatagcct 500
Query: 301 atgtcagtaggccccttcttccataattcctgcctctgctattgtatct 349
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgtcagtaggccccttcttccataattcctgcctctgctattgtatct 549
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 749
Length adjustment: 9
Effective length of query: 340
Effective length of database: 740
Effective search space: 251600
Effective search space used: 251600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
