TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAATAAATTTCTACACAGTTAGACTAGGCTTTTGGAACAGAAGCTG
TGGATCCCCACATTAAATTTTATATTTTAAGTGTAAAACCCATTTTCTGC
GGCAGAGTATCTCACCAAATGCAGAGTGAGATTATCTAAACAGCAAGCTT
CAGGCATCCTCTTGTGTCACTGCCCCAGCACTCAGATTGTGGTAACTTGC
TACAGCCCAAAAGGTTATAGATCAGTGCTTGAAAGCTAACCTCGGGCCTG
CATACGTGTATGTCAAGCACTTCGTCTACTGTGCTTCTCCCCAGCCCCTA
CTTGTGCTATTATTATAGACATACATAAAATATCAATGATTACACAAGGT
AAATTCCAAGGTAATCTATGTCTGCAGATTAAACTGCTTTGTGTAAGTTA
CTGGGAAGTTAGGAGGCTGGGCATTAGAGAAGATTGATCAATTTTTTAAG
ACCTGAACAATGACAATATCAATCTTGCTAACATAGAAGAGAAAACAAAA
ATCTCACAGGGTCTCATCTCTAGACAAAAACCCACAGGAAAGTAATTCTG
AAACCACTGAGAGAATTGGCCTTTTCCAGGCCAGAGCACCCTGACTGTTC
CTCCAATCTAATGTGGGCATCCCTGAAACCATATACATACAAACAACAAA
AACAGACATAGCAG

CAAACTTTCCCTTTTTCNTNNTTGAGGAAGGGGGAACATTCAAAAAGTCA
NCCAGAAAGGGAGGAGAGGGGGGAGGTTGGGAAAGANGNNNTGGTCAAAA
AAAGGGGGGGGNGANNNGGAGAGTTTTGGCGAAAAAAGGGGGGGGGNNGN
GGAGGAGGAGGGAGAGAGAAGGAAGGGAGANGGGGAAAAAATTATTATTC
TCGGAAAAAAAGAGGGGGGAGAGANNAAAAAAAGAAAGGGGGGGGGAGGA
GGGGGGTGAGAGAGGGGGGAGAGGGGAAGGAGGAGGGGAGGAGGAGGGGG
GGGGGGAAGGGGTGGGGGGTTTTGGTTGAGAAGGAGAGGGGGGGGTACGA
GAAGAAGAGGTAAGGGGGGGGAGTGAGAGGGATAGGGAGAAAGAGGGGAG
GAGGGAGAAGGAGTGGGGGGTATGGAAAGAGAGAGAGAGGGGAGGGAAAA
GAGATGGGAGGGGGGAGAGGGAGAAGGAGTTTGATGTTGGGAGAAAGGGG
GAGAGTGAGAATGAGAAAAAGAAAGAGGGGAGAAGGGAGTAATGAGATAT
GAGATGAGAGCGAGGAAGAAAGAAGGGGGATGTGAAAAAGAGGGAGAGGA
GAGGAGGAGAAGGGAGGTAAAGAGGGGGGAGAAGGAGAAAAAGAAGAAAA
AAAATAAGAAAAGAAAGAAGAAAGGGAGAGGGGAGGGGGGGAGGAGAGGG
AGAAGGAGAAAGGGGGAAGAGGGGGAAGGAGGAGAGGAAGGGAGGAAGGA
AGGGAGAGAGGGGAGGTAGAGAGGATGGAGAGGTAGAGAAGGGAGAAGGG
GGAGGGAGAAAGGAAGAGGGGGAATGAGTGAGGGAAGGAGGGAGAGAGGA
GAAGAGGGGGAGGCGAGAAGAGTGAGTGGAGGGAACAGAGGAAAGAAGGA
GGGGAGGGGAAAGGAGTGGAAGAAGAGAGAGGATAAGGACAGGTTGAGGC
AGAGAGGGGAGGAAGNCACAGAGAGAGAATATGAGAGGAATACGAGGAGG
AGAAGAGGTGTTATTGAGAGAGAGAGAAAGGAGGGGAGAGAGGAGATAAT
AGGGAGGGGGACGTGTGAAATGTGAGAGGAGGGGTAGGGAGAAAGGGGGA
GGGGAGGAGGAGAAGAGGGAGAGAGG

Query= MSMg01no236_k01.b1 MSMg01no236_k01.b1 CHROMAT_FILE:
MSMg01no236_k01.b1 PHD_FILE: MSMg01no236_k01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:14 2005
         (669 letters)



>mm_chr8_131345008_131346075
          Length = 1068

 Score = 1255 bits (649), Expect = 0.0
 Identities = 661/665 (99%), Gaps = 1/665 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcaataaatttctacacagttagactaggcttttggaacagaagctgtggatcccc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952 gaattcaataaatttctacacagttagactaggcttttggaacagaagctgtggatcccc 893

                                                                       
Query: 65  acattaaattttatattttaagtgtaaaacccattttctgcggcagagtatctcaccaaa 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892 acattaaattttatattttaagtgtaaaacccattttctgcggcagagtatctcaccaaa 833

                                                                       
Query: 125 tgcagagtgagattatctaaacagcaagcttcaggcatcctcttgtgtcactgccccagc 184
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 tgcagagtgagattatctgaacagcaagcttcaggcatcctcttgtgtcactgccccagc 773

                                                                       
Query: 185 actcagattgtggtaacttgctacagcccaaaaggttatagatcagtgcttgaaagctaa 244
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 772 actcagattgtggtaacttgctacagcccaaaaggttatagatcggtgcttgaaagctaa 713

                                                                       
Query: 245 cctcgggcctgcatacgtgtatgtcaagcacttcgtctactgtgcttctccccagcccct 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 cctcgggcctgcatacgtgtatgtcaagcacttcgtctactgtgcttctccccagcccct 653

                                                                       
Query: 305 acttgtgctattattatagacatacataaaatatcaatgattacacaaggtaaattccaa 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 acttgtgctattattatagacatacataaaatatcaatgattacacaaggtaaattccaa 593

                                                                       
Query: 365 ggtaatctatgtctgcagattaaactgctttgtgtaagttactgggaagttaggaggctg 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 592 ggtaatctatgtctgcagattaaactgctttgtgtaagttactgggaagttagga-gctg 534

                                                                       
Query: 425 ggcattagagaagattgatcaattttttaagacctgaacaatgacaatatcaatcttgct 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 ggcattagagaagattgatcaattttttaagacctgaacaatgacaatatcaatcttgct 474

                                                                       
Query: 485 aacatagaagagaaaacaaaaatctcacagggtctcatctctagacaaaaacccacagga 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 aacatagaagagaaaacaaaaatctcacagggtctcatctctagacaaaaacccacagga 414

                                                                       
Query: 545 aagtaattctgaaaccactgagagaattggccttttccaggccagagcaccctgactgtt 604
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 413 aagtaattctgaaaccactgagagaattggcctcttccaggccagagcaccctgactgtt 354

                                                                       
Query: 605 cctccaatctaatgtgggcatccctgaaaccatatacatacaaacaacaaaaacagacat 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 cctccaatctaatgtgggcatccctgaaaccatatacatacaaacaacaaaaacagacat 294

                
Query: 665 agcag 669
           |||||
Sbjct: 293 agcag 289


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1068
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1058
Effective search space:   697222
Effective search space used:   697222
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)