Query= MSMg01no236_k24.b1 MSMg01no236_k24.b1 CHROMAT_FILE:
MSMg01no236_k24.b1 PHD_FILE: MSMg01no236_k24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:18 2005
(239 letters)
>mm_chr8_25095591_25096232
Length = 642
Score = 426 bits (220), Expect = e-124
Identities = 236/242 (97%), Gaps = 3/242 (1%)
Strand = Plus / Minus
Query: 1 gcaactagagtgttc--tttc-tcttccattccctctcaccctgcccccagccatgaagt 57
||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gcaactagagtgttctttttcttcttccattccctctcaccctgcccccagccatgaagt 383
Query: 58 aaatagctatcccccctcacactgagttcaagtccagaagcaatgagtctaatgaccatg 117
|||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 382 aaatagctatgctccctcacactgagttcaagtccagaagcaatgagtctaatgacaatg 323
Query: 118 gctgaaacctccaaagttgtgagccaaaataaatgtgtttctattatctgaggcattttg 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gctgaaacctccaaagttgtgagccaaaataaatgtgtttctattatctgaggcattttg 263
Query: 178 ttataaatagaaagctaatgcaggtaccaaggatggagggcatttctgccctcctctgaa 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ttataaatagaaagctaatgcaggtaccaaggatggagggcatttctgccctcctctgaa 203
Query: 238 aa 239
||
Sbjct: 202 aa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 642
Length adjustment: 9
Effective length of query: 230
Effective length of database: 633
Effective search space: 145590
Effective search space used: 145590
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no236_k24.g1 MSMg01no236_k24.g1 CHROMAT_FILE:
MSMg01no236_k24.g1 PHD_FILE: MSMg01no236_k24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:18 2005
(298 letters)
>mm_chr8_24919501_24920198
Length = 698
Score = 516 bits (267), Expect = e-151
Identities = 288/295 (97%)
Strand = Plus / Plus
Query: 1 ataattgaatgggctgttagcaattagggcctgcctggaggagatgtatcacggaggagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataattgaatgggctgttagcaattagggcctgcctggaggagatgtatcacggaggagt 260
Query: 61 gggtgtgggttcatctgaaagaaaccttgctcttgcctgttccctcttcctccatgatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggtgtgggttcatctgaaagaaaccttgctcttgcctgttccctcttcctccatgatgt 320
Query: 121 aaccaaatacctattcccccttcagatcactaacaccttaatattcccctctctgctgcc 180
||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 321 aaccaaatatctcttcccccttcagatcactaacaccttacgattcccctctctgctgcc 380
Query: 181 ttggcccagccctgcaatgctcccgcttcatttttgttttatgcagtcattccagagtct 240
| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 tcggcccagccctgcaatgctcccgcttcatttttgttttatgcagtcactccagagtct 440
Query: 241 ggactatcacctgaagatttggatcgatgagagagatctcatgtgacctttttct 295
||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 441 ggactatcacctgaagatttggatcgatgagagagatctcatgtgtcctttttct 495
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 698
Length adjustment: 9
Effective length of query: 289
Effective length of database: 689
Effective search space: 199121
Effective search space used: 199121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
