Query= MSMg01no237_b05.b1 MSMg01no237_b05.b1 CHROMAT_FILE:
MSMg01no237_b05.b1 PHD_FILE: MSMg01no237_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:48 2005
(443 letters)
>mm_chr8_22861694_22862536
Length = 843
Score = 323 bits (167), Expect = 1e-92
Identities = 278/323 (86%), Gaps = 14/323 (4%)
Strand = Plus / Plus
Query: 135 agttgccttggtcatggtgtctgttcagagcagtaaaactctctaagacaagaagcaaag 194
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 335 agttgccttggtcatggtgtttgttcagagcagtaaaactctctaagacatgaagcaaag 394
Query: 195 caggatgtctcacccagatatatacatcatatgaagtatctctgcacatgtcatgaaact 254
||||| ||||||| || ||||| |||||||||||||||||| |||||||||| ||| ||
Sbjct: 395 caggaagtctcactcaaatatacacatcatatgaagtatctgtgcacatgtcgggaagct 454
Query: 255 ggatttgatatatgtaggcctgacttcacacacacacacactcaaaaa------------ 302
||||||||||||||||||||||||||||||||||||||||| || | |
Sbjct: 455 ggatttgatatatgtaggcctgacttcacacacacacacacacacacacacacacacaca 514
Query: 303 -aact-tgtgtgtatgtctttagctataccttaagatatagaggtgtaggtatcttaaaa 360
||| ||||| | |||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 515 caaccatgtgtacaggtctttagctataccttaagatatctaggtgtaggtatcttaaga 574
Query: 361 tatctttatctatttttctcaattggtgctaagctgttggaaattgtgactaatgtcact 420
||||||| |||| |||| || | |||||||||||| |||||||||||||||||||||
Sbjct: 575 tatctttgtctacccttcttaaccgatgctaagctgttagaaattgtgactaatgtcact 634
Query: 421 tgcatgaccagatgtcctgtgac 443
| ||||||||||| |||||||||
Sbjct: 635 tacatgaccagatatcctgtgac 657
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no237_b05.g1 MSMg01no237_b05.g1 CHROMAT_FILE:
MSMg01no237_b05.g1 PHD_FILE: MSMg01no237_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:48 2005
(291 letters)
>mm_chr8_106517726_106518416
Length = 691
Score = 395 bits (204), Expect = e-114
Identities = 271/298 (90%), Gaps = 10/298 (3%)
Strand = Plus / Plus
Query: 1 catggagactcatggagcctggtccctggcactgattggcaacagagcccacggtggaaa 60
||||||| ||||||||||| |||||||||||||||| |||||||||||| ||||||||
Sbjct: 201 catggaggctcatggagccaggtccctggcactgatcagcaacagagcccggggtggaaa 260
Query: 61 caggtcctgggcacgatctgtgaacagcttgtctccaaaggctgtgtctcttctaatgaa 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caggtcctgggcatgatctgtgaacagcttgtctccaaaggctgtgtctcttctaatgaa 320
Query: 121 tgctgcaaagactctggcctctag--------cagggaggttcttataagagcagtgtct 172
|||||||||||||||||||||||| ||||||||||||| |||||||| ||||
Sbjct: 321 tgctgcaaagactctggcctctagaagcacaccagggaggttcttggaagagcagcgtct 380
Query: 173 gccattttcttgtctctgtcagagagagcacaacctgtcctcaggcaacaccccagagta 232
||||||||||||||||||||| ||| |||||| ||||||| |||||||||| ||||||||
Sbjct: 381 gccattttcttgtctctgtcacagacagcacagcctgtccccaggcaacacaccagagta 440
Query: 233 ttgaatttgtttgaag-tcctggctctggtctcctacttagagaacatttcaagagca 289
|||||||||||| ||| || |||||||||||||||||||||||| |||||||||||||
Sbjct: 441 ttgaatttgtttaaagatc-tggctctggtctcctacttagagagcatttcaagagca 497
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
