TCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCCAAAGACTTACCTACCATTGGGCTGATTTCTATTGCAACATGGC
ATTTTTCTAATGTTGTTTAAATGCAGAAAGTAGCTATTTGCCCACAATTT
ATGTAACTACACATTGGCTAAATTACAGGTGAAAATGACTCTAACCAACT
ATGGGGAACAAGTCATTCAGTCATCTAGATGGTCATTGTATGCATATGGA
TTGAGCTCAGGTATTTTGGATAAAGAAGACTTGATTGTATTTTTAAAAGA
CAAATTTCATCGACAGATTGTGGAAAATGTTATCATATGTTGCCTTTTAA
TTTTGAAAATGAACAAAAATAAAGTTTATGAAATACCCCTAACTTAGCAC
AATAGGCCAAAGAAAGTTAGCTATTGTTAAGCTAATCTGCAATATTATAA
AATTCAGATTCTCATGTGTGTGTGTACCTGAGACTGTTTACTCTGATGAT
TCTCAGAACAGAGTTAATGAAACCCAAATTAATGATGTTTTTATTTACCT
CTGTCCCATGATTCAAGTTTTCCCTTGCTGGATGCAGTAGGAATCGTTCA
CAAGATTGCTGATTGTCCTTAGGGAAATTAAACATTGTTATAAGCAGGCA
TCCCAAAACAAAAGACAAAGAAAATCTTGATCTCATGGTTAATGTGGACA
TGCAGTTTGCCAGCTGCCAAGTAAGGGAAATGAGGGCATGTCTCAGTGT

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCT
GAGAAACATCTGAAAAAATGCTCAGCATCCTTAATCATCAGAGAAATGCA
AATCAAAACAACCCTGAGATTCCATCTGACACCAGACAGAATGGCTAAGA
TCAAAAATTCAGGTGACAGCAGATGCTGGTGAGGATGTGGAGAAAGAGGA
ACAACCCTTCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAA
ATCAGTTTGGCGATTCCTCAGAAAATTGGACATAGTACTACTGGAGCATC
CCGCAATACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACCGGTAAG
AAGGACACATGCTCCACTATGTTCATAGAAGCCTTATTTATAAGAGCCAG
AAGCTGGAAATAACCCAAATGCCCCTCAACAGAGGAATGGATACAAAAAA
TGTGGTACATTTACACAATGGAGTACTACTCAGCTATTTAAAAGAGTGAA
TTTATGAAATTCCTAGGCAAATGGTAAGACCTGGAGGGCATCATCCTGAG
TGAGGTAACACAATCACAAAAGAACTCAAATGATATGTACTCACTGATAA
GTGGATATTAGCCCAGAAACTTAGTATACCTGAGATATAAGAGACAATTT
GTAAAACATATGAAACTGAAGAACAAAGACCAAAGTGTGGACACTTTGCC

Query= MSMg01no260_h18.b1 MSMg01no260_h18.b1 CHROMAT_FILE:
MSMg01no260_h18.b1 PHD_FILE: MSMg01no260_h18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:35 2005
         (703 letters)



>mm_chr8_54307551_54308653
          Length = 1103

 Score = 1261 bits (652), Expect = 0.0
 Identities = 685/696 (98%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccaaagacttacctaccattgggctgatttctattgcaacatggcatttttctaa 64
           ||||||||||||||||   || ||||||||||||||||||||||||||||||||||||||
Sbjct: 900 gaattccaaagacttaaagactattgggctgatttctattgcaacatggcatttttctaa 841

                                                                       
Query: 65  tgttgtttaaatgcagaaagtagctatttgcccacaatttatgtaactacacattggcta 124
           |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 840 tgttgtttaaattcagaaagtagctatttgcccacaatttatgtaactacacaatggcta 781

                                                                       
Query: 125 aattacaggtgaaaatgactctaaccaactatggggaacaagtcattcagtcatctagat 184
           ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 780 aattacaggtgaaaatgactctaactaattatggggaacaagtcattcagtcatctagat 721

                                                                       
Query: 185 ggtcattgtatgcatatggattgagctcaggtattttggataaagaagacttgattgtat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 720 ggtcattgtatgcatatggattgagctcaggtattttggataaagaagatttgattgtat 661

                                                                       
Query: 245 ttttaaaagacaaatttcatcgacagattgtggaaaatgttatcatatgttgccttttaa 304
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 660 ttttaaaagacaaatttcatcgacagattgtggaaaatgttatcatatgttgccatttaa 601

                                                                       
Query: 305 ttttgaaaatgaacaaaaataaagtttatgaaatacccctaacttagcacaataggccaa 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ttttgaaaatgaacaaaaataaagtttatgaaatacccctaacttagcacaataggccaa 541

                                                                       
Query: 365 agaaagttagctattgttaagctaatctgcaatattataaaattcagattctcatgtgtg 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 agaaagttagctattgttaagctaatctgcaatattataaaattcagattctcatgtgtg 481

                                                                       
Query: 425 tgtgtacctgagactgtttactctgatgattctcagaacagagttaatgaaacccaaatt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 tgtgtacctgagactgtttactctgatgattctcagaacagagttaatgaaacccaaatt 421

                                                                       
Query: 485 aatgatgtttttatttacctctgtcccatgattcaagttttcccttgctggatgcagtag 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 aatgatgtttttatttacctctgtcccatgattcaagttttcccttgctggatgcagtag 361

                                                                       
Query: 545 gaatcgttcacaagattgctgattgtccttagggaaattaaacattgttataagcaggca 604
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 360 gaatcgttcacaagattgctgattgtccttagggaaattaaacattgttataagcaggta 301

                                                                       
Query: 605 tcccaaaacaaaagacaaagaaaatcttgatctcatggttaatgtggacatgcagtttgc 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tcccaaaacaaaagacaaagaaaatcttgatctcatggttaatgtggacatgcagtttgc 241

                                               
Query: 665 cagctgccaagtaagggaaatgagggcatgtctcag 700
           ||||||||||||||||||||||||||||||||||||
Sbjct: 240 cagctgccaagtaagggaaatgagggcatgtctcag 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 703
Length of database: 1103
Length adjustment: 10
Effective length of query: 693
Effective length of database: 1093
Effective search space:   757449
Effective search space used:   757449
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)