NNNNCCATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCCTCCATGTTCATGATGGGATCGCAGCGAGGAAGGCGC
GGCAGCGACAGCGAGCAGAGGCAACCCAGTCTGGACTGGTCCCTGAGAGG
AGGGTTTCCCCAGAACCTACAGCTCAAGCCAGGTACGTAGCGTGGAAGGA
GAAAGAGGATTCCCACGCCGCGTGGACAGCGTTGTTAGCCGCAGCTTCCA
GACAACACTGTGGAGAACAGAGGCAGCTCAGCGGGAGTCGGCCAGCACCT
GGGGCCCAGGTTTAGATTTGGCTTCACTAACTGATGCTTCTCCGCCCTAC
CATGCCTGCACCTCCCACTGCTGATAGCTGAGAGGTCTTCTGGTTCCTCG
CTGAGCTCACACACCCCTCCCTGGCTATCCAGAAACCTTAGAACTGAGAT
AAGTCTCCAGCAGATGGGACCCTTCCCTCCCCGTAGAAAACGGAGTCAAC
ACACACAGGAGAACCTGTGGCCTCTCTAAGGAACCTTTGTGCCTGCCTGG
CTCAGGATCCAGAGCGCCTAACTCCTGGTGTGAACTTAAGTAAGGTGATG
GATGGCCATGCCATGCTGCGCAGCATCAGGCTATCCAGAGCCTCCCAAAA
CACTGTGGTCGCCTCCTTGTTACAGTCTAGAGAGTGATGCCCATATGCTT
GAGATATAGAGACCTCACTCCAGATGGTTTTCTCCTTCN

CCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXACTAGAAATTTATGATTATTAG
CCTCAGAGCTAGAGTTTTATTTTCTAGGTGAGAGAAGGTGGCACTGGGAG
AGGGCTCTGAGGTACCCTGCTCTGGAAAGAGACAAGATGGCTGCTCTGAG
TCAGAGAGCAGGTTAATGGAAGCTGCTACATCTTGGGGCAGATATTGATT
TAACTGTGAATTTATAAAAATGGCATCATTTACTTTTAGGATGAATTTAT
ATAGCAATTTTGGCTAAATCAAGTAGGAAATTTTGCCTGTGGTTCTGAAC
TAAAATAGGGAAATTAGTAACTGATTTCAAGTAGAGAGGGCAGTGAGAAT
TATCTGCTATGAACAGGTATTAATTAATAAATGTCTGTGGCTCCAGGTAG
AGAGCTCAACAGATAGAAGGGATATCAAGATGGCTGCTCTAGATAGAGAG
CTTAACAAGTAAAAACTACCTATTCCTATAGGCATACATTAGTGAAAGTT
TGAATGAATTGGTTTAAATATGATATAAAGATACATTGCTCTACTAAGTT
TTATAGGATACTCAAATTCTGTCTGTGGGCTCCACAGGAGTCTTGTGTTT
AAATCGTGGTTTAACTAACTGCCTCCTTATAAGCAGGTATAGATAGAAGT
GTGAATCAATTGTTTATAAAGGTGGTATAATAAGGTC

Query= MSMg01no260_o12.b1 MSMg01no260_o12.b1 CHROMAT_FILE:
MSMg01no260_o12.b1 PHD_FILE: MSMg01no260_o12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:09 2005
         (661 letters)



>mm_chr8_61391564_61392624
          Length = 1061

 Score = 1263 bits (653), Expect = 0.0
 Identities = 659/661 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggatcgcagcgaggaaggcgcggcagcgacagcgagcagaggcaacccagtctggac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgggatcgcagcgaggaaggcgcggcagcgacagcgagcagaggcaacccagtctggac 260

                                                                       
Query: 61  tggtccctgagaggagggtttccccagaacctacagctcaagccaggtacgtagcgtgga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggtccctgagaggagggtttccccagaacctacagctcaagccaggtacgtagcgtgga 320

                                                                       
Query: 121 aggagaaagaggattcccacgccgcgtggacagcgttgttagccgcagcttccagacaac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggagaaagaggattcccacgccgcgtggacagcgttgttagccgcagcttccagacaac 380

                                                                       
Query: 181 actgtggagaacagaggcagctcagcgggagtcggccagcacctggggcccaggtttaga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actgtggagaacagaggcagctcagcgggagtcggccagcacctggggcccaggtttaga 440

                                                                       
Query: 241 tttggcttcactaactgatgcttctccgccctaccatgcctgcacctcccactgctgata 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttggcttcactaactgatgcttctccgccctaccatgcctgcacctcccactgctgata 500

                                                                       
Query: 301 gctgagaggtcttctggttcctcgctgagctcacacacccctccctggctatccagaaac 360
           |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 501 gctgagaggtcttctggttcctcgcttagctcacacacccctccctggttatccagaaac 560

                                                                       
Query: 361 cttagaactgagataagtctccagcagatgggacccttccctccccgtagaaaacggagt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttagaactgagataagtctccagcagatgggacccttccctccccgtagaaaacggagt 620

                                                                       
Query: 421 caacacacacaggagaacctgtggcctctctaaggaacctttgtgcctgcctggctcagg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caacacacacaggagaacctgtggcctctctaaggaacctttgtgcctgcctggctcagg 680

                                                                       
Query: 481 atccagagcgcctaactcctggtgtgaacttaagtaaggtgatggatggccatgccatgc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atccagagcgcctaactcctggtgtgaacttaagtaaggtgatggatggccatgccatgc 740

                                                                       
Query: 541 tgcgcagcatcaggctatccagagcctcccaaaacactgtggtcgcctccttgttacagt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgcgcagcatcaggctatccagagcctcccaaaacactgtggtcgcctccttgttacagt 800

                                                                       
Query: 601 ctagagagtgatgcccatatgcttgagatatagagacctcactccagatggttttctcct 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ctagagagtgatgcccatatgcttgagatatagagacctcactccagatggttttctcct 860

            
Query: 661 t 661
           |
Sbjct: 861 t 861


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1061
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1051
Effective search space:   684201
Effective search space used:   684201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)