NCCTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTNGAGGGCCGCGG
AATTATTCTCTTGCAAAAAGAGCTTCCTCCTGTTTCCCCAACTGCTCCCA
ATGCCTGATCATGTTCCTCTTTTACCCTCACCTCCCCTCTCCCACCCAGG
TCCCTCCCTTTTTCTGCCCCTAGAATTTTTTTCTCTCTCCCAAGTGAGAT
GGAAGCATCGTTACTTGTTCCCTTTGGCTTGTTAACCTTTTTGAGTTGTG
TGGGTTTTATCCTGGATATTCTGTACTATTTTGGCTAATATCCACTTATT
AGTGAGTATATTTTTTTGTTGTCCTTTGGATTCTGAGTTCCCTCCCTCAG
GATGATATTTTCTACCTCCACCCATTTGCTTACAAAAACATAGCTGATTA
GTATCCCACTATGTAAATGAATCACAACATCTGTATCCATTCTTCCATTG
TGGGGCATCTGGATTGTTTCCAGATCCTGGATATAGCAAATCTCAACCTA
GTGGAGCACATGCCCCTGTAGCATGGTGTAGCTGAGTCTTTAGGTAGATC
TATTTCCAATTTTCTGAAAAATGTGCAGATTTATATACAGAGTGGTTGTA
CCAGTTTGCAATCCCACCAGCAATGGAGGAGTGTTCCTCTTCATCCGCAT
TCTCACCAACATATGCTATCACCAGAGTTTTTGATCCTCATGGATGCCTT
ATTTAACAGAGCTT

NCCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCTGAGACAACATTTTATTTGGGAT
CCAAACAGAAACTTAAACCCTGACGTGCTAAGCTGTGCATTTTTATGTCT
TCAGTATTTCATCTAGGAAAGAGGCTTAAATTCACTAAGTTTAAGACTAG
ACTGCACCATATTCCCACATTTTCTTACTGCAAAGTAAATGGATTTTAGT
ATTGTGGTTCACATTGTCCCTCTTAAATATTTTTTTCCTCCAAATCTAAT
TTCTTAGTCTGGCTGAAGTCAGAAGATCTGGAACTCAGGCCTTCCTTGCT
GTTCCCTGCACTGTGATTCCCTAATCCAGATTTTTGATGGCCGCTACTCC
TGTCACTGCTTGTCACTTGAGGTTTCTATAAGTGACTTCAGAGGGACCAT
TTTGAATATTGCTTTTCTGAAATGAAAGCAGATTTCAGCTTCTGCTCTAA
TGTTTATTTAATGTTATGAAACACTGGGTCACATTGTTAAGATAAATAAC
TAATATATTGAATGTCTCTGGAAGAGAGGCGTTTTTTTTTTTTCCTGTTT
TCTTCTAAAGGAAATAAGAAGAAAAGGAGAGCCTACTGAGTTTGTTCAGT
GAGTATGTTCAGGAAGTTCTTTCTGCAACTGCATGAAGACCTAAGTTTGA
ATTCCCAGCTAAATTCCCAG

Query= MSMg01no261_m12.g1 MSMg01no261_m12.g1 CHROMAT_FILE:
MSMg01no261_m12.g1 PHD_FILE: MSMg01no261_m12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:15 2005
         (574 letters)



>mm_chr8_51911810_51912789
          Length = 980

 Score = 1079 bits (558), Expect = 0.0
 Identities = 572/580 (98%), Gaps = 6/580 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctgagacaacattttatttgggatccaaacagaaacttaaaccctgacgtgctaagctgt 60
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 ctgagacaacattttatttgggatccaaacagaaacttaaaccatgacgtgctaagctgt 260

                                                                       
Query: 61  gcatttttatgtcttcagtatttcatctaggaaagaggcttaaattcactaagtttaaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcatttttatgtcttcagtatttcatctaggaaagaggcttaaattcactaagtttaaga 320

                                                                       
Query: 121 ctagactgcaccatattcccacattttcttactgcaaagtaaatggattttagtattgtg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctagactgcaccatattcccacattttcttactgcaaagtaaatggattttagtattgtg 380

                                                                       
Query: 181 gttcacattgtccctcttaaatatttttttcctccaaatctaatttcttagtctggctga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttcacattgtccctcttaaatatttttttcctccaaatctaatttcttagtctggctga 440

                                                                       
Query: 241 agtcagaagatctggaactcaggccttccttgctgttccctgcactgtgattccctaatc 300
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 441 agtcagaagatctggaactcaggccttccttgttgttccctgcactgtgattccctaatc 500

                                                                       
Query: 301 cagatttttgatggccgctactcctgtcactgcttgtcacttgaggtttctataagtgac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagatttttgatggccgctactcctgtcactgcttgtcacttgaggtttctataagtgac 560

                                                                       
Query: 361 ttcagagggaccattttgaatattgcttttctgaaatgaaagcagatttcagcttctgct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttcagagggaccattttgaatattgcttttctgaaatgaaagcagatttcagcttctgct 620

                                                                       
Query: 421 ctaatgtttatttaatgttatgaaacactgggtcacattgttaagataaataactaatat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctaatgtttatttaatgttatgaaacactgggtcacattgttaagataaataactaatat 680

                                                                       
Query: 481 attgaatgtctctggaagagaggcgtttt------ttttttttcctgttttcttctaaag 534
           |||||||||||||||||||||||||||||      |||||||||||||||||||||||||
Sbjct: 681 attgaatgtctctggaagagaggcgttttgtttttttttttttcctgttttcttctaaag 740

                                                   
Query: 535 gaaataagaagaaaaggagagcctactgagtttgttcagt 574
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gaaataagaagaaaaggagagcctactgagtttgttcagt 780


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 980
Length adjustment: 10
Effective length of query: 564
Effective length of database: 970
Effective search space:   547080
Effective search space used:   547080
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)