Query= MSMg01no262_o01.b1 MSMg01no262_o01.b1 CHROMAT_FILE:
MSMg01no262_o01.b1 PHD_FILE: MSMg01no262_o01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:37 2005
(609 letters)
>mm_chr8_127946359_127947367
Length = 1009
Score = 1139 bits (589), Expect = 0.0
Identities = 601/605 (99%)
Strand = Plus / Minus
Query: 5 gaattctcaatcttatttcaggtcttgactcagatgaagaactcgggcttctctgtcacc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 gaattctcaatcttatttcaggtcttgactcagatgaagaactcgggcttctctgtcacc 750
Query: 65 acgcctcctacctaggtgattgacacgcgttcttgctgttttgtagcctgttttgtattc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 acgcctcctacctaggtgattgacacgcgttcttgctgttttgtagcctgttttgtattc 690
Query: 125 catacgtctgcacgcctgcatggtggtccacatactgtgttgggggtgcacagggacgtg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 catacgtctgcacgcctgcatggtggtccacatactgtgttgggggtgcacagggacgtg 630
Query: 185 tgccctggctgtcctgtctcgggaatgttctcgagctcatgggagcttgcagcagggtcc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 tgccctggctgtcctgtctcgggaatgttctcgagctcatgggagcttgcagcagggtcc 570
Query: 245 atctccatggttgtcaccagccacgtcatccagcttgctaaaccacacacagctaggagc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 569 atctccatggttgtcaccagccacgtcatccagcttgctaaaccacacacagccaggagc 510
Query: 305 tttagattcctcggagtgtggaaagaagaaagccaacttgctctgtagctgtggtatatg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 tttagattcctcggagtgtggaaagaagaaagccaacttgctctgtagctgtggtatatg 450
Query: 365 caccataccctccctgtggagggcacccagcctcatgcttcttcattgccaccggcttgc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 449 caccataccctccctgtggagggcacccagcctcatgcttcttcattgccaccagcttgc 390
Query: 425 ctgagtttctgtttctccattttgtttcaaacagggcattgtggtaaggagggtcagcag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ctgagtttctgtttctccattttgtttcaaacagggcattgtggtaaggagggtcagcag 330
Query: 485 attccattcagtaaattggtctttacaaaatcacgtgaactggtggctctcaccaacctc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 attccattcagtaaattggtctttacaaaatcacgtgaactggtggctctcaccaacctc 270
Query: 545 ctttctttctgttcctcatctccagaccagacggtagcctccttctgtaccctgacggac 604
||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct: 269 ctttctttctgttcctcatctccagaccagagggtagcctccttctgtaccctgaccgac 210
Query: 605 ctcca 609
|||||
Sbjct: 209 ctcca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1009
Length adjustment: 10
Effective length of query: 599
Effective length of database: 999
Effective search space: 598401
Effective search space used: 598401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no262_o01.g1 MSMg01no262_o01.g1 CHROMAT_FILE:
MSMg01no262_o01.g1 PHD_FILE: MSMg01no262_o01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:37 2005
(212 letters)
>mm_chr8_127905079_127905689
Length = 611
Score = 371 bits (192), Expect = e-107
Identities = 207/212 (97%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 1 cccaggagacccctaggtgggtggtaaccgaacactgcatgcattgggtgactacctcaa 60
|||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 201 cccaggagacccctaggtgggtggtaaccgaacattgcattcattgggtgactacctcaa 260
Query: 61 ctgtactgagaggttttctgcagagccttgtatatggacctcgtatagagaggcactggg 120
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 261 ctgtactgagaggttttctgcagagccttgtatat-gacctggtatagagaggcactggg 319
Query: 121 agaccaaagatgactccacccatgtcccacttggttgggttacttggggaaagcgagagt 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 320 agaccaaagatgactccacccaagtcccacttggttgggttacttggggaaagcgagagt 379
Query: 181 atgggtgggggattaggatgtggtctgagttc 212
||||||||||||||||||||||||||||||||
Sbjct: 380 atgggtgggggattaggatgtggtctgagttc 411
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 212
Length of database: 611
Length adjustment: 9
Effective length of query: 203
Effective length of database: 602
Effective search space: 122206
Effective search space used: 122206
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
