Query= MSMg01no265_p10.b1 MSMg01no265_p10.b1 CHROMAT_FILE:
MSMg01no265_p10.b1 PHD_FILE: MSMg01no265_p10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:37 2005
(316 letters)
>mm_chr8_101922298_101923011
Length = 714
Score = 561 bits (290), Expect = e-164
Identities = 306/312 (98%), Gaps = 2/312 (0%)
Strand = Plus / Minus
Query: 5 gaattccaaatcgcatctagtcccgtaggttctggatacagacttcctcattagctttat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 gaattccaaatcgcatctagtcccgtaggttctggatacagacttcctcattagctttat 455
Query: 65 catatgtataaaagcaaaaaaaaacagatgcttagatacattaataaaccagattatgaa 124
||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 454 catatgtataaaagc--aaaaaaactgatgcttagatacattaataaaccagattatgaa 397
Query: 125 tacagcacaagtgaatgtactacatgaaattaaatcatggcggtgattcccaagataata 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tacagcacaagtgaatgtactacatgaaattaaatcatggcggtgattcccaagataata 337
Query: 185 atttcaaccatcataccatattatgtttcagtcactgagtaccaggggtttacaatttgc 244
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 336 atttcaaccatcataccatattatgtttcagtcactgagtaccaggggtttataatttgc 277
Query: 245 acttgacttgtgtgtataggatacaaaatcagtacattcatccttttctatattcaaatt 304
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 276 acttgacttgtgtgtataggatacaaaatcagtacattcatccttctctatattcaactt 217
Query: 305 ttctttaaccag 316
||||||||||||
Sbjct: 216 ttctttaaccag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 714
Length adjustment: 9
Effective length of query: 307
Effective length of database: 705
Effective search space: 216435
Effective search space used: 216435
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no265_p10.g1 MSMg01no265_p10.g1 CHROMAT_FILE:
MSMg01no265_p10.g1 PHD_FILE: MSMg01no265_p10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:37 2005
(287 letters)
>mm_chr8_101755091_101755777
Length = 687
Score = 547 bits (283), Expect = e-160
Identities = 283/283 (100%)
Strand = Plus / Plus
Query: 1 acaggtaaagagagaagactgtggaatagctttatgacttctgaaactgggaaaccaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acaggtaaagagagaagactgtggaatagctttatgacttctgaaactgggaaaccaagg 260
Query: 61 ggactatgatgtcattggaaatacatgtgagggcagacccagtgttattgtcctttctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggactatgatgtcattggaaatacatgtgagggcagacccagtgttattgtcctttctct 320
Query: 121 gttaaaagccattcacagagtagctatttagcatttttattaattaagtggctaattgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttaaaagccattcacagagtagctatttagcatttttattaattaagtggctaattgaa 380
Query: 181 tgcatatattggaattgcctggtgatttattgaaaatactaatgtcacagatcatttaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcatatattggaattgcctggtgatttattgaaaatactaatgtcacagatcatttaca 440
Query: 241 gaaaatatgttaataaaataatacttgcattatttctactgca 283
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaaatatgttaataaaataatacttgcattatttctactgca 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
