ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCATGTGAAGAGGCGACCTTTTAGGGTTTCCGAGAGGGCCAGCTCAATG
GGAAGAAACCAAGTCATCTTGTTAGGAGGAAAAAGTGATTCTCTTTTCTC
AGATTTCTATACAGGATCAATTATGACACCATGTGTGGCCATGCGGAACC
CACGGCTTTCACTAAAATGAGATGGTTCGCTCCCTAATGCGAAGTCGGGA
CATGCTCACAATATCACTTTGAGAAAACCATACTTAGTCCTGGATGATGT
AACTTGTACAAGTCTCAGCAAAGCGGCACTGGCTCAGATCCTATGACTAA
TGATGCGATGTCCTTTATGCATCCCTCCCACATAGATGACATGTAGAAAG
AAGAAATAAAACGCCCCAAAGGCATTTGTTTGCGCTGTTGAAAACTGGGA
ACTCGGAGATATCTAATGCTAGACTTAGAGTTAACTGAAGTCTGACATTT
ATTGTTTTATACAACAAGAACCAAAACATGACCATTAGGGACTGGAGAGA
TGGCTCAGCATTTAAGAGCACACACTGCTCTTGCACAGGACCAGGGTTCG
GTTTTCAGTACTCATCTTTGGCAGCTTGCAACTCCCCGTAACTTCTGCTC
CAGGGGATACGATACCTTTTTCCACCTCCACACAAACTTCCACTCACATG
TACCCCTCCACATATATATATATAT

TGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXAAGGAGGAAAATGAGAGATTGAGTATA
AAGACTATGGGCTTCGGGGTCACACTAGAGTTTCAATACTTGGAAAGGGC
TGGTTTGCTCATTGGGCAGGTCTTCGTGAGCATACGAAGTGTGTTAATTA
GTCTTCTCATAGCTCCCACAGAATGTTCAACAGGAACACATTAAGGGAAA
ATGCCTTTATCCTTGGCTCACAGTTTCCGACAGAATTTTTTAATCATGGT
CAGGATGGCATAACTTCATCTGTGGTAGTGTGTGGTGGTTTGAATATGCT
TGGTCCATAGAGAGCAGCACTGTTAGGGGGCATGACCTTGTTGGAGGAAG
TGTGTCACTGCGTGGCCAGGCTTTGGAGGTCTCCTCCTAGTTGCCTGCAG
AAAACAGTCTGTCCTGGTTGCCTTTGAATCAAGATGGAGAACTCTCAGCT
CCTTCTCCAGCACCATGTCTGCCTGCATGCTGCCATGATACCTGCTATGA
TGATAGTGGACTGAACCCCTGAAACTGTAAGCCAGTTCCAATTGCCCCCA
TATCAATTCACTTTTGTCAGCCAGACCCCATGTCTCCATTTCACCTCAGG
TATACGTTTCAGACAAGGGCAAAAAGCAGCTTCACTCTTCACCAAACCAT
CACAAGAACTGTGCCTAGGCCACAT

Query= MSMg01no269_l12.b1 MSMg01no269_l12.b1 CHROMAT_FILE:
MSMg01no269_l12.b1 PHD_FILE: MSMg01no269_l12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:08:14 2005
         (251 letters)



>mm_chr8_117744305_117744955
          Length = 651

 Score =  470 bits (243), Expect = e-137
 Identities = 249/251 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ggcatttgtttgcgctgttgaaaactgggaactcggagatatctaatgctagacttagag 60
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 317 ggcatttgtttgcgctgttgaaaactgggaactcgtagatatctaatgctagacttagag 258

                                                                       
Query: 61  ttaactgaagtctgacatttattgttttatacaacaagaaccaaaacatgaccattaggg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ttaactgaagtctgacatttattgttttatacaacaagaaccaaaacatgaccattaggg 198

                                                                       
Query: 121 actggagagatggctcagcatttaagagcacacactgctcttgcacaggaccagggttcg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 actggagagatggctcagcatttaagagcacacactgctcttgcacaggaccagggttcg 138

                                                                       
Query: 181 gttttcagtactcatctttggcagcttgcaactccccgtaacttctgctccaggggatac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 gttttcagtactcatctttggcagcttgcaactccccgtaacttctgctccaggggatac 78

                      
Query: 241 gataccttttt 251
            ||||||||||
Sbjct: 77  aataccttttt 67


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space:   155364
Effective search space used:   155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no269_l12.g1 MSMg01no269_l12.g1 CHROMAT_FILE:
MSMg01no269_l12.g1 PHD_FILE: MSMg01no269_l12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:08:14 2005
         (589 letters)



>mm_chr8_117577319_117578307
          Length = 989

 Score = 1054 bits (545), Expect = 0.0
 Identities = 578/589 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaggaggaaaatgagagattgagtataaagactatgggcttcggggtcacactagagttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 aaggaggaaaatgagagattgagtataaagactatgggcttcggggtcagactagagttt 260

                                                                       
Query: 61  caatacttggaaagggctggtttgctcattgggcaggtcttcgtgagcatacgaagtgtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 caatacttggaaagggctggtttgctcattgggcaggtcttcgtgagcatacggagtgtg 320

                                                                       
Query: 121 ttaattagtcttctcatagctcccacagaatgttcaacaggaacacattaagggaaaatg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttaattagtcttctcatagctcccacagaatgttcaacaggaacacattaagggaaaatg 380

                                                                       
Query: 181 cctttatccttggctcacagtttccgacagaattttttaatcatggtcaggatggcataa 240
           ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 381 cctttatccttggctcacagtttccaacagaatttttaaatcatggtcaggatggcataa 440

                                                                       
Query: 241 cttcatctgtggtagtgtgtggtggtttgaatatgcttggtccatagagagcagcactgt 300
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 441 cttcatctgtggtagtgtgtggtggtttgaatatgcttggtccatagagatcagcactgt 500

                                                                       
Query: 301 tagggggcatgaccttgttggaggaagtgtgtcactgcgtggccaggctttggaggtctc 360
           ||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||
Sbjct: 501 tagggggcatgaccttgttggaggaagtgtgtcactgtgtgggtaggctttggaggtctc 560

                                                                       
Query: 361 ctcctagttgcctgcagaaaacagtctgtcctggttgcctttgaatcaagatggagaact 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 561 ctcctagttgcctgcagaaaacagtctgtcctggttgcctttgaatcaagatgcagaact 620

                                                                       
Query: 421 ctcagctccttctccagcaccatgtctgcctgcatgctgccatgatacctgctatgatga 480
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 621 ctcagctccttctccagcaccatgtctgcctgcatgctgccatgatacttgctatgatga 680

                                                                       
Query: 481 tagtggactgaacccctgaaactgtaagccagttccaattgcccccatatcaattcactt 540
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 681 tagtggactgaacccctgaaactgtaagccagctccaattgcccccatatcaattcactt 740

                                                            
Query: 541 ttgtcagccagaccccatgtctccatttcacctcaggtatacgtttcag 589
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttgtcagccagaccccatgtctccatttcacctcaggtatacgtttcag 789


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 989
Length adjustment: 10
Effective length of query: 579
Effective length of database: 979
Effective search space:   566841
Effective search space used:   566841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)