Query= MSMg01no269_m08.b1 MSMg01no269_m08.b1 CHROMAT_FILE:
MSMg01no269_m08.b1 PHD_FILE: MSMg01no269_m08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:08:18 2005
(117 letters)
>mm_chr8_85765386_85765902
Length = 517
Score = 165 bits (85), Expect = 1e-45
Identities = 106/113 (93%)
Strand = Plus / Plus
Query: 5 gaattcaacccaatacccgtgggtgcatttttctgtccactgaaacttgctggattagaa 64
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaacccaaaattggtgggtgcatttttctgtccactgaaacttgctggattagaa 264
Query: 65 caaaagaaaactaacccttttaagatttattttagatatttgtgtgtgtgtgt 117
||||||||||| || | ||||||||||||||||||||||||||||||||||||
Sbjct: 265 caaaagaaaacaaaacattttaagatttattttagatatttgtgtgtgtgtgt 317
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 117
Length of database: 517
Length adjustment: 8
Effective length of query: 109
Effective length of database: 509
Effective search space: 55481
Effective search space used: 55481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no269_m08.g1 MSMg01no269_m08.g1 CHROMAT_FILE:
MSMg01no269_m08.g1 PHD_FILE: MSMg01no269_m08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:08:18 2005
(289 letters)
>mm_chr8_85921782_85922470
Length = 689
Score = 551 bits (285), Expect = e-161
Identities = 288/289 (99%), Gaps = 1/289 (0%)
Strand = Plus / Minus
Query: 1 tctaaatggctttagattggtctgtcaatgggttcatttcaactgtac-cacatgtggag 59
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 608 tctaaatggctttagattggtctgtcaatgggttcatttcaactgtacacacatgtggag 549
Query: 60 gcatttggagtttgcggggacggagaacaatttgtacagaggcaggcaggcaggcaggca 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 gcatttggagtttgcggggacggagaacaatttgtacagaggcaggcaggcaggcaggca 489
Query: 120 tgatctttgccttatacaattatggaagttatgagaagaaattggccatggtagcctagc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tgatctttgccttatacaattatggaagttatgagaagaaattggccatggtagcctagc 429
Query: 180 acatgctgtgatgtaacctccttgcagtgtcagagctctcagctatgtgtttcagggtgt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 acatgctgtgatgtaacctccttgcagtgtcagagctctcagctatgtgtttcagggtgt 369
Query: 240 gaggacctcctagacagtgaactcccctcctgctcagctggagcagagg 288
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 gaggacctcctagacagtgaactcccctcctgctcagctggagcagagg 320
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
