Query= MSMg01no273_m24.b1 MSMg01no273_m24.b1 CHROMAT_FILE:
MSMg01no273_m24.b1 PHD_FILE: MSMg01no273_m24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:15 2005
(311 letters)
>mm_chr8_54307550_54308260
Length = 711
Score = 578 bits (299), Expect = e-169
Identities = 308/311 (99%)
Strand = Plus / Minus
Query: 1 aatattataaaattcagattctcatgtgtgtgtgtacctgagactgtttactctgatgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 aatattataaaattcagattctcatgtgtgtgtgtacctgagactgtttactctgatgat 452
Query: 61 tctcagaacagagttaatgaaacccaaattaatgatgtttttatttacctctgtcccatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tctcagaacagagttaatgaaacccaaattaatgatgtttttatttacctctgtcccatg 392
Query: 121 attcaagttttcccttgctggatgcagtaggaatcgttcacaagattgctgattgtcctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 attcaagttttcccttgctggatgcagtaggaatcgttcacaagattgctgattgtcctt 332
Query: 181 agggaaattaaacattgttataagcaggcatcccaaaacaaaagacaaagaatatcttga 240
|||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 331 agggaaattaaacattgttataagcaggtatcccaaaacaaaagacaaagaaaatcttga 272
Query: 241 tctcatggttaatgtggacatgcagtttgccagctgccaagtaagggaaatgagggcatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 tctcatggttaatgtggacatgcagtttgccagctgccaagtaagggaaatgagggcatg 212
Query: 301 tctcagtgtga 311
|||||| ||||
Sbjct: 211 tctcagcgtga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 711
Length adjustment: 9
Effective length of query: 302
Effective length of database: 702
Effective search space: 212004
Effective search space used: 212004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no273_m24.g1 MSMg01no273_m24.g1 CHROMAT_FILE:
MSMg01no273_m24.g1 PHD_FILE: MSMg01no273_m24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:15 2005
(284 letters)
>mm_chr8_54181543_54182227
Length = 685
Score = 534 bits (276), Expect = e-156
Identities = 282/284 (99%), Gaps = 1/284 (0%)
Strand = Plus / Plus
Query: 1 ctttgttattggactcaaaccaagtttcctgtaatgttgcctggttgcttttgtcacttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctttgttattggactcaaaccaagtttcctgtaatgttgcctggttgcttttgtcacttc 260
Query: 61 acacttccatttttctcttgcataaagtggagacagtaatagtatttatattatagagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acacttccatttttctcttgcataaagtggagacagtaatagtatttatattatagagtt 320
Query: 121 gtgataagattttttaaaagttctttaaaaactgcccagtacctagcaatgatgagcatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgataagattttttaaaagttctttaaaaactgcccagtacctagcaatgatgagcatc 380
Query: 181 actacatatattttgctgagtcatctttttataaacaattgtcatcagttttgccagtag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actacatatattttgctgagtcatctttttataaacaattgtcatcagttttgccagtag 440
Query: 241 tgatagtaactctgaaaaaaaacta-atttgcgactagaaatgg 283
||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 441 tgatagtaactctgaaaaaaaactatatttgcaactagaaatgg 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 685
Length adjustment: 9
Effective length of query: 275
Effective length of database: 676
Effective search space: 185900
Effective search space used: 185900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|