Query= MSMg01no274_l08.b1 MSMg01no274_l08.b1 CHROMAT_FILE:
MSMg01no274_l08.b1 PHD_FILE: MSMg01no274_l08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:18 2005
(226 letters)
>mm_chr8_122520400_122521024
Length = 625
Score = 377 bits (195), Expect = e-109
Identities = 216/223 (96%), Gaps = 3/223 (1%)
Strand = Plus / Plus
Query: 5 gaattcaaggtgatcctcaaccatgtgatgaggtcaaggcttgcttgctctgtgtgagat 64
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 205 gaattcaaggtgatcctcaaccatgtgatgaagtcaaggctcgcttgctctgtgtgagat 264
Query: 65 cctgccccagttgtgtcgtgtggttctgtggatgtgtgtgcagaggagacagcaggtcac 124
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cctgccccagttgtg-cgtgtggttctgtggatgtgtgtgcagaggagacagcaggtcac 323
Query: 125 acggtcattggatgtgtaacggtgagaaagctggctccatcatact-ccgtgaggttggc 183
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 324 acggtcattggatgtgtaacggtgagaaagctggctccatcat-cttccgtgaggttggc 382
Query: 184 ttgagccgggctttcacccggcatgcatggagttcttccgtgg 226
||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 383 ttgagccgggctttcacccggcaggcagggagttcttccgtgg 425
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 226
Length of database: 625
Length adjustment: 9
Effective length of query: 217
Effective length of database: 616
Effective search space: 133672
Effective search space used: 133672
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no274_l08.g1 MSMg01no274_l08.g1 CHROMAT_FILE:
MSMg01no274_l08.g1 PHD_FILE: MSMg01no274_l08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:18 2005
(102 letters)
>mm_chr8_122694414_122694915
Length = 502
Score = 170 bits (88), Expect = 2e-47
Identities = 97/100 (97%)
Strand = Plus / Minus
Query: 1 aggatcacaaaggctcacgtcaggtcagcagtgcacgggatgatggaccctgcagtatgc 60
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 300 aggatcacaaaggctcaggtcaggtcagcagtgcacgggatgatggagcctgcagtatgc 241
Query: 61 cttactatgtctggtgacctgtggactggctcagggctta 100
|||||||||||||||||||||||||||||| |||||||||
Sbjct: 240 cttactatgtctggtgacctgtggactggcacagggctta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 3
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 102
Length of database: 502
Length adjustment: 8
Effective length of query: 94
Effective length of database: 494
Effective search space: 46436
Effective search space used: 46436
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
