XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CCATTAACACTCCCATTTTGATTTGCACATTTGGTATTTTAGGAGCCTGA
AAAAGGACACACACACACACACACACACACACACACACACACACACACAC
ACACACACAAATCCATCTGAATCCTGTATGCTTCCCTGAGTAAGAATAGC
TTTACTTTCATTTGTTCACAGCATGCAGCTGGTTACAATCAGATACAGAG
TTGGATACCTCACTGCTAACTCTGATAGGAATATTCAACTACATCCCTCA
CTCTGCCAACGTTCTGAGTCTACACAATGCCAAGTTCAACAGTGTCTTCC
AGACTCAATAGGACCAAAACATATATTTAAACTCACTGTGAGGATGAGAG
CAAGCCCTGATGGACTGACATGCACAAGTGCAAACCAGACAAAATCCCAG
CAGCAAAAAGTGGAAGGACACACGAAGTCCACCCTAACCAGGAAGCTATT
TGAAATTGCTACCTTCCAGGAGAGTTATAATCAGTTTTTTTTTTCCAGTG
AAGTGTCACTGGGTATATCAACCACACTACAGGACATGTTCCATGCCCAG
AAATAGCTGGCAAACACAAATAAGATTCCATGTCTTTTTGTGAAATTTTT
GTTTTGTTTTGTTTGCTGATTTTTGTCTTATTGGTATTTATTTGATTTAG
TTTTAATTTGACAAAGAGAGAGAGACAGATAGAGGCAGAGAGAGGC

ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXAACACCCCACTTTCACTAATGGACATGTT
ATTGAAATAGATACTAAACACAGATACAGTGAAACTAATAGAGGTTATGA
ACCAAATGGATTTAACAGATAACTACAGAACATTTCATCCTAAAAAAAAA
AAAAATACACCTTCTTGTCAGCTGCTCATGGTACCTTCTCCAAAATCAAA
TAAAATTGGTCATAAAACTATCCTCCGGTAGCCATCTTGGTTCCGGGACT
CCACAGAAAGTAGTCTGCACAGGTGAGAGTGTGGACTACAGAAGCAAATA
GCTTCTGGGTTTTGCGAGAGCCACAGAGTTTCTGAGGCAGCACCATTTTC
GGGCTCCAGACATCCGACAACATTCCCTGCCAGAGAACAGGTGTCCACCC
AACCCAGGAGGCTTTTGCCTCAGGATCTTCAGGAACCATCTCGGTTCCTG
GACTCTGCAGAAAGTAGTCTTCACAGGTGAGAGTGTGGAATACAGAAGCT
AACAGCTTCTGGGAACTGCCAAAGCAACACAGCTTCTGAGAAAGGCCCTG
TTTTGGGCCTTCTTCTTCGACCAGGAGGAGGTCCAAAAACAAGATATCTG
CACACCTTCCCTGTAAGAGAGCTTGCCAGCAGAGAGTGCTCTGAGCACTG
AAACTCAGAGGAGAGAATCTGTCTCCCAGGTCTGCTGATAGACGGTA

Query= MSMg01no275_a13.b1 MSMg01no275_a13.b1 CHROMAT_FILE:
MSMg01no275_a13.b1 PHD_FILE: MSMg01no275_a13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:42 2005
         (666 letters)



>mm_chr8_100574991_100576056
          Length = 1066

 Score = 1091 bits (564), Expect = 0.0
 Identities = 596/612 (97%), Gaps = 11/612 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccattaacact--cccattttgatttgcacatttggtattttaggagcctgaaaa 62
           ||||||||||||||||     |||||||||||||||||||||||||||||||||||||||
Sbjct: 603 gaattccattaacacttg---attttgatttgcacatttggtattttaggagcctgaaaa 547

                                                                       
Query: 63  aggacacacacacacacacacacacacacacacacacacacacacacacacacacaaatc 122
           |||      |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 agg------acacacacacacacacacacacacacacacacacacacacacacacaaatc 493

                                                                       
Query: 123 catctgaatcctgtatgcttccctgagtaagaatagctttactttcatttgttcacagca 182
            |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 492 gatctgaattctgtatgcttccctgagtaagaatagctttacttccatttgttcacagca 433

                                                                       
Query: 183 tgcagctggttacaatcagatacagagttggatacctcactgctaactctgataggaata 242
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 432 tgcagctggttacaatcagatacagagttggatacctcactgctaactctgataggaaca 373

                                                                       
Query: 243 ttcaactacatccctcactctgccaacgttctgagtctacacaatgccaagttcaacagt 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ttcaactacatccctcactctgccaacgttctgagtctacacaatgccaagttcaacagt 313

                                                                       
Query: 303 gtcttccagactcaataggaccaaaacatatatttaaactcactgtgaggatgagagcaa 362
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 312 gtcttccagactcaataggaccaaaacatatatttaaactcactgtgagggtgagagcaa 253

                                                                       
Query: 363 gccctgatggactgacatgcacaagtgcaaaccagacaaaatcccagcagcaaaaagtgg 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gccctgatggactgacatgcacaagtgcaaaccagacaaaatcccagcagcaaaaagtgg 193

                                                                       
Query: 423 aaggacacacgaagtccaccctaaccaggaagctatttgaaattgctaccttccaggaga 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 aaggacacacgaagtccaccctaaccaggaagctatttgaaattgctaccttccaggaga 133

                                                                       
Query: 483 gttataatcagttttttttttccagtgaagtgtcactgggtatatcaaccacactacagg 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 gttataatcagttttttttttccagtgaagtgtcactgggtatatcaaccacactacagg 73

                                                                       
Query: 543 acatgttccatgcccagaaatagctggcaaacacaaataagattccatgtctttttgtga 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72  acatgttccatgcccagaaatagctggcaaacacaaataagattccatgtctttttgtga 13

                       
Query: 603 aatttttgtttt 614
           ||||||||||||
Sbjct: 12  aatttttgtttt 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 75
Number of extensions: 22
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space:   692736
Effective search space used:   692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)