Query= MSMg01no275_p14.b1 MSMg01no275_p14.b1 CHROMAT_FILE:
MSMg01no275_p14.b1 PHD_FILE: MSMg01no275_p14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:49 2005
(309 letters)
>mm_chr8_77734082_77734790
Length = 709
Score = 532 bits (275), Expect = e-155
Identities = 299/309 (96%), Gaps = 4/309 (1%)
Strand = Plus / Plus
Query: 5 gaattcaggaagcacaggcaggcatctctctgtgagttctaggccagctaggacttcata 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaattcaggaagcagaggcaggcatctctctgtgagttctaggccagctaggacttcata 260
Query: 65 gagagaccctgccttaaaacaaacaaacaaacaaacaaacaaacaaacaaacaaac---- 120
||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagagacactgtcttaaaacaaacaaacaaacaaacaaacaaacaaacaaacaaacaaac 320
Query: 121 ctaaagactcctcccaaccccctctctgctcaagaaaaggtcagatgttgatggggatgg 180
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctaaagactcttccaaaccccctctctgctcaagaaaaggtcagatgttgatggggatgg 380
Query: 181 ggttaagaggaccaggaggttcagaccatcgggaatactggaagaaagcagtgtgggtga 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 ggttaagaggaccaggaggttcagaccatcggaaatactggaagaaagcagtgtgggtga 440
Query: 241 aaccctttgggagtgtgctttgaaggatgtgtagtgttcaaccttgggaaagtgttatag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaccctttgggagtgtgctttgaaggatgtgtagtgttcaaccttgggaaagtgttatag 500
Query: 301 tgatggtgg 309
|||||||||
Sbjct: 501 tgatggtgg 509
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 309
Length of database: 709
Length adjustment: 9
Effective length of query: 300
Effective length of database: 700
Effective search space: 210000
Effective search space used: 210000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no275_p14.g1 MSMg01no275_p14.g1 CHROMAT_FILE:
MSMg01no275_p14.g1 PHD_FILE: MSMg01no275_p14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:49 2005
(341 letters)
>mm_chr8_77898447_77899187
Length = 741
Score = 652 bits (337), Expect = 0.0
Identities = 340/341 (99%)
Strand = Plus / Minus
Query: 1 ccaaaggcagaaaaaaaatgctagcaggggtagctccaatttctaaatgagcacttcaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ccaaaggcagaaaaaaaatgctagcaggggtagctccaatttctaaatgagcacttcaac 482
Query: 61 ctagaggctaggtgagcatggagaggaagttgcaggacaggcaccacagtcttctagtaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 481 ctagaggctaggtgagcatggagaggaagttgcaggacaggcaccacagtcttctagcaa 422
Query: 121 acagctttggagatggacttttggattatcatggaacaaacaagttatatctgttcccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acagctttggagatggacttttggattatcatggaacaaacaagttatatctgttcccca 362
Query: 181 atttcaacctatttcctcaattattttaggcccttaattcttggtggggggtgggtaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atttcaacctatttcctcaattattttaggcccttaattcttggtggggggtgggtaatg 302
Query: 241 gtggccttctagaacatcagagatggctaccagagctctgtttatgcttaataaagagac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtggccttctagaacatcagagatggctaccagagctctgtttatgcttaataaagagac 242
Query: 301 attattccttcctggacaaaagaatccaatctacctttggc 341
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 attattccttcctggacaaaagaatccaatctacctttggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
