TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCAAACCTTTGAGAGTAAGCATCAGGCCAGCTAAGAGTCCAGCAATG
AACTCCCAGCTGGTGGTTCAGACCGGGTATGGAACTTACAACAACCTATC
TACACCAAGACCTGGAGGTACTTAATGTCCACGAGGTCTCAAATCACTGG
ACCTACTTGCTGGTGTTATCTACGAGAAGGAAGAAGCTCCCAGGAAATGA
GTAGGGAAGTGGAGTGATTAAGGCTATGACGTGGAGAGATCAGAGCCGTG
GGGCCACATTTTCTGTTCTTCCTAATATATGACGAATCTTATCTTATTAG
GAAAGTCCAGATTTATCATGCACACTTCGTGTGTATTAACATATGGATTG
TAGTTTGAACTGTTCCTCAAAGGTTTGTAGGTTAAAGGGGTTGGTCTTCC
TCCATGAGAGGATGAGGAATCTAGCAAGCCTTTAGTAAGCAAGGCCCAAT
GGCTAGAAGTCATGTCCCTGACTGTGTCTCTCAAGGCAATATGTGGATTC
TACCTTTCTCCACTCTCATTATTTCTTTGCCTCCTGACCAGCACAAGATA
TGGCCATTATGTACTACGTTGCCACACCCCAGGCCCCCCTCAATCAATAA
AGCCTAAGAGCCCTGGACTGAGTCTGAAACTGCGAGCTAAAATAAAACTT
TCTTCTTTTTAAGTTGCTAATAGCTGGTGTTTTGTCACAGTAATGAN

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTGTCCTGACTTCTAATGATGGGCTA
TGATCTGGAAATGTAAGCCCAATAAGAACCCTTTCCTCTCCAACTTGCTT
TTTGCTTATGGTGTTTAAAAACCCTAACCAAGACATCACCCCACTAGAGA
CCAGGTCTCTGACACATTTATGAGTTACCCTGAGGTCTAGTCTCAAGAAT
ATGTCTAGCGTAGGCAGACTTTACCTTAGAATAGTGGATCATGATGACTG
ACAAAAGTTGGACTGTCTTGGAAAAAGCCCAAGGAAACCCCGGAAGGGGA
TTTTTTTTTAAACCCCCCCCTCCCCCCCAAGTGGGGACCCCTTTTGGGAC
AAAACACGCGGGGGGGGGGTGTCCCCCCCCCCCCCTGGGGCCAGGAGCGC
GGGGAAAAAAAAAAAAAAAAAAAAAAANAGGGAGNAAAAAAAAAAAAAAA
GACCCCCTTTCATTTGGGGGAAAGAAAAATCCCCCCCCTCCCTCTAAAAA
AAAACACACCCCCCCCCCCCCCCCCCAGTGGTAAAAAAAGGAGGATTTGT
TTTTTTTTTTTTATTCCGCGCGCCCCCCGCCCCCCCTCTCTTTTTATTTT
GTGTGTAAAAAAAAGAAAACTTACAAAGTC

Query= MSMg01no276_j03.b1 MSMg01no276_j03.b1 CHROMAT_FILE:
MSMg01no276_j03.b1 PHD_FILE: MSMg01no276_j03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:32 2005
         (367 letters)



>mm_chr8_118460255_118461020
          Length = 766

 Score =  625 bits (323), Expect = 0.0
 Identities = 353/365 (96%), Gaps = 5/365 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccaaacctttgagagtaagcatcaggccagctaagagtccagcaatgaactccca 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaaacctttgagagtaagcatcaggccagctaagagtccagcaatgaactccca 264

                                                                       
Query: 65  gctggtggttcagaccgggtatggaacttacaacaacctatctacaccaagacctggagg 124
           ||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 265 gctggtggtgcagacagggtatggaacttacaacaacctatctacaccaagtcctggagg 324

                                                                       
Query: 125 tacttaatgtccacgaggtctcaaatcactggacctacttgctggtgttatctacgagaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tacttaatgtccacgaggtctcaaatcactggacctacttgctggtgttatctacgagaa 384

                                                                       
Query: 185 ggaagaagctcccaggaaatgagtagggaagtggagtgattaaggctatgacgtggagag 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggaagaagctcccaggaaatgagtagggaagtggagtgattaaggctatgacgtggagag 444

                                                                       
Query: 245 atcagagccgtggggccacattttctgttcttcctaatatatgacgaatcttatcttatt 304
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 445 atcagagccgtggggccacattttctgttcttcctaatatatgatgaatcttatcttatt 504

                                                                       
Query: 305 aggaaagtccagattt--atcatgcacacttcgtgtgtattaacatatggattgtagttt 362
           |||||||||||||     | || ||||||||||||||||||||||||||||||||||| |
Sbjct: 505 aggaaagtccaga---ggaccaggcacacttcgtgtgtattaacatatggattgtagtct 561

                
Query: 363 gaact 367
           |||||
Sbjct: 562 gaact 566


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 766
Length adjustment: 9
Effective length of query: 358
Effective length of database: 757
Effective search space:   271006
Effective search space used:   271006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)