Query= MSMg01no276_k09.b1 MSMg01no276_k09.b1 CHROMAT_FILE:
MSMg01no276_k09.b1 PHD_FILE: MSMg01no276_k09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:37 2005
(296 letters)
>mm_chr8_64030800_64031495
Length = 696
Score = 542 bits (280), Expect = e-158
Identities = 292/296 (98%)
Strand = Plus / Plus
Query: 1 gtaggctgtcttgcacatgtgctcccacttcatgtgtttaggacgggactcggaatagac 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 gtaggctgtcttgcacatgtgctcccacttcatgtgtttaggacgggactaggaatagac 260
Query: 61 cttgtaaaagccacccaccagcttcagaaagccactacccagaactcttttgcccatttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttgtaaaagccacccaccagcttcagaaagccactacccagaactcttttgcccatttc 320
Query: 121 ctcaaagcccgttccacatcctcaccttctatagctcctcgggcttccaagctgtgggat 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcaaagcctgttccacatcctcaccttctatagctcctcgggcttccaagctgtgggat 380
Query: 181 actctcccacactctctggctgacatcgcacctggtgactttcattaaaggcactgttcc 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 actctcccacactctctggctgacattgcacctggtgactttcattaaaggcactgttcc 440
Query: 241 ccgactctgtcggccccagcaagagagtcacagatgtgtctgaagataatttaagt 296
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccgactctgtcggccccggcaagagagtcacagatgtgtctgaagataatttaagt 496
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 696
Length adjustment: 9
Effective length of query: 287
Effective length of database: 687
Effective search space: 197169
Effective search space used: 197169
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no276_k09.g1 MSMg01no276_k09.g1 CHROMAT_FILE:
MSMg01no276_k09.g1 PHD_FILE: MSMg01no276_k09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:38 2005
(241 letters)
>mm_chr8_64181754_64182399
Length = 646
Score = 422 bits (218), Expect = e-122
Identities = 239/246 (97%), Gaps = 5/246 (2%)
Strand = Plus / Minus
Query: 1 acccttgcctgagactgcagcgattcttttctgataacccctttgtggatgttttgttcc 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 acccctgcctgagactgcagcgattcttttctgataacccctttgtggatgttttgttcc 387
Query: 61 tctggggttttgtctaaggtttggcatctttcttccctattgtgaggtggtttaaggagg 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 386 tctggggttttgtctaaggtttggcatctttcttccctattgtgaggtgatttaaggagg 327
Query: 121 cgtgaagtctgagagg-tcacttgcttcttgaatttcaggaactac-gaa-acagcagcc 177
|||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 326 cgtgaagtctgagagggtcacttgcttcttgaatttcaggaactacagaacacagcagcc 267
Query: 178 tccgagggccaggtggtggtgctggaatgcagagtccgagggg-acccccgctgcag-tc 235
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 266 tccgagggccaggtggtggtgctggaatgcagagtccgaggggcacccccgctgcaggtc 207
Query: 236 cagtgg 241
||||||
Sbjct: 206 cagtgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 646
Length adjustment: 9
Effective length of query: 232
Effective length of database: 637
Effective search space: 147784
Effective search space used: 147784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
