Query= MSMg01no279_d10.b1 MSMg01no279_d10.b1 CHROMAT_FILE:
MSMg01no279_d10.b1 PHD_FILE: MSMg01no279_d10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:45 2005
(326 letters)
>mm_chr8_59310553_59311280
Length = 728
Score = 576 bits (298), Expect = e-169
Identities = 317/324 (97%), Gaps = 2/324 (0%)
Strand = Plus / Plus
Query: 5 gaattcttctccctttcagtatgatttatacaatcagtcaaatctctgatttgtttagct 64
|||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctctccctttcagtgtgatttatacaatcagtcaaatctctgatttgtttagct 264
Query: 65 ccctcagcgatctccagtgtttgcttcttgcatgccttcctttcttgtctatggagagtt 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccctcagcgatctccagtgtttgcttcttgcatgccttcctttcttgtctatggagagtg 324
Query: 125 tctttcaaagtacct--agaactaaaaaagatgctgcaagagaaagacattgaaatatat 182
|||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tctttcaatgtacctgtagaactaaaaaagatgctgcaagagaaagacattgaaatatat 384
Query: 183 cattgcctttatgtgaatcttacattttcccctcttatgagtttgtactatctttcctac 242
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cattgccttcatgtgaatcttacattttcccctcttatgagtttgtactatctttcctac 444
Query: 243 aaggagttgtaatcttagttggttcgctctagagccaagacaagattccacacatttctg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaggagttgtaatcttagttggttcgctctagagccaagacaagattccacacatttctg 504
Query: 303 aaatagctgctataatttattgtc 326
||||||||||||||||||||||||
Sbjct: 505 aaatagctgctataatttattgtc 528
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 728
Length adjustment: 9
Effective length of query: 317
Effective length of database: 719
Effective search space: 227923
Effective search space used: 227923
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no279_d10.g1 MSMg01no279_d10.g1 CHROMAT_FILE:
MSMg01no279_d10.g1 PHD_FILE: MSMg01no279_d10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:45 2005
(291 letters)
>mm_chr8_59462768_59463458
Length = 691
Score = 547 bits (283), Expect = e-160
Identities = 289/291 (99%)
Strand = Plus / Minus
Query: 1 catggctccacgtttgtgttttgctttgttttgttttcccacattaatgattgacattct 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 491 catggctccacgtttgtgttttgctttgttttgttttcccacatgaatgattgacattct 432
Query: 61 gcttcaggcttgggaatggtgccttagaattgtgaagttaccaggtcgtcttgagctgtg 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gcttcaggcttggcaatggtgccttagaattgtgaagttaccaggtcgtcttgagctgtg 372
Query: 121 ctgaaacagatctctagtggcactgtatacatttacaatacttctctgtggccaattgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ctgaaacagatctctagtggcactgtatacatttacaatacttctctgtggccaattgga 312
Query: 181 ggagacactcagcttagtatggatgtgtgcatagcgtttataggatgtcagacaaaatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ggagacactcagcttagtatggatgtgtgcatagcgtttataggatgtcagacaaaatga 252
Query: 241 ttttttattgaggaagggtcaagcaagttgtgttttctgttgtgtcacact 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ttttttattgaggaagggtcaagcaagttgtgttttctgttgtgtcacact 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
