Query= MSMg01no280_c09.b1 MSMg01no280_c09.b1 CHROMAT_FILE:
MSMg01no280_c09.b1 PHD_FILE: MSMg01no280_c09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:20:55 2005
(493 letters)
>mm_chr8_87053027_87053920
Length = 894
Score = 706 bits (365), Expect = 0.0
Identities = 380/385 (98%), Gaps = 1/385 (0%)
Strand = Plus / Minus
Query: 6 gaattccaggactttg-ctattcattcatttgtcctctcaggtgggaaactgagacctag 64
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaattccaggacagtgtatattcattcatttgtcctctcaggtgggaaactgagacctag 326
Query: 65 agaggcagactcacctgctcactgtcctttgccccatggagtgtcctgtgaaggtgtcta 124
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agaggcagactcacatgctcactgtcctttgccccatggagtgtcctgtgaaggtgtcta 266
Query: 125 agccagatctcccagatcctatgagtgatacctggagtctctgcacgtgttaccatgtct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agccagatctcccagatcctatgagtgatacctggagtctctgcacgtgttaccatgtct 206
Query: 185 agatgcagtcatcagggcaggccctaaccgtgtgaccagtgtcctcttaaaaaggggtca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 agatgcagtcatcagggcaggccctaaccgtgtgaccagtgtcctcttaaaaaggggtca 146
Query: 245 gtcaggacacagagacagacacacatggaaggactgaacaagggggaggtgaagacaggg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 gtcaggacacagagacagacacacatggaaggactgaacaagggggaggtgaagacaggg 86
Query: 305 atggaaggctgttagctggggaggagaccggaaaggatcccattcaggtgtgggtgtctg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 atggaaggctgttagctggggaggagaccggaaaggatcccattcaggtgtgggtgtctg 26
Query: 365 agcgatcacacaaccctgctgacat 389
|||||||||||||||||||||||||
Sbjct: 25 agcgatcacacaaccctgctgacat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 493
Length of database: 894
Length adjustment: 10
Effective length of query: 483
Effective length of database: 884
Effective search space: 426972
Effective search space used: 426972
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no280_c09.g1 MSMg01no280_c09.g1 CHROMAT_FILE:
MSMg01no280_c09.g1 PHD_FILE: MSMg01no280_c09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:20:55 2005
(290 letters)
>mm_chr8_86896072_86896761
Length = 690
Score = 530 bits (274), Expect = e-155
Identities = 286/290 (98%)
Strand = Plus / Plus
Query: 1 accggggttcttggcttctctgttcctgtctctttgtggtcatatttccggaactatggg 60
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 201 accggggttcttggcttctctgttcctgtctctttgtggtcagatttctggaactatggg 260
Query: 61 aagcaccgtgggaacaacatgaagcagctagaatttgttctggctcacggtttctcaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagcaccgtgggaacaacatgaagcagctagaatttgttctggctcacggtttctcaggg 320
Query: 121 ctcagtccatggtcacttggttctgctgctttgggtctgtggcaaggtaccgtctataag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcagtccatggtcacttggttctgctgctttgggtctgtggcaaggtaccgtctataag 380
Query: 181 gtaagggcaatgcttaccaatcagggagtcacagtcaacccaactcatagcatcctgaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtaagggcaatgcttaccaatcagggagtcacagtcaacccaactcatagcatcctgaag 440
Query: 241 ctagacaccttccaggtcaagggcgtctggtcagtacacaagctcccctt 290
||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctagacaccagccaggtcaagggcgtctggtcagtacacaagctcccctt 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
