TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CCACAGAATCTGAACACATCAGAGGAATTCACCTCTGTATTTCCATCGTA
GAAGGGTAAAGATGAGGACCACTCATGAAAACAAAATTGGGAAGGTGGAC
TTCCTCCAATGAAGACAGATTCTTTGGAATCAATGGATGCGCCAATTGTA
CCACAGAGTAACTATATTCTGAAACTCTATGCTACAATGCCTTTTGAAGT
TTCTAAAGAAGAAGCATGGTGCTAAAGATTTGAGCACCACCCTGGGAAAT
TTTAACATGTCAAAAACAGAACAAATATCATAGATGATATCTATGGTATG
AAGTGCTTGACAACATTTTTATAAATGCTCACTGCATTCTGAGAAGAAAT
AGTTTTTAACTGCATTCTGTTATTAGTTCAAATGCAGACCTTGTATGTAT
ATAGAAATCTATGCTTTGACGTTGTGGACAGAAGGGACAAATGTTTGCGT
TTACTTCATTTTGCTTTCTGTACTTAGTCTAAATGATTCTCTGTGCTCAC
CCTTAAAACATATCAGGTACATCTCATATGTAGGTTTTGTTAATAGTATT
ATTACCACTCATACATTAGACCTTATATAATACAAATAATAAGGGCAGGG
TAGAATTATGTAATGAAAACAGTGTATCTGTGAAGATGTGAAAATTTTAT
ATACAAAACCTTATAATAACAAAAGTCATTCTATAAAGTCCCCATAGTTT
CCTGTGATGGATCA

GCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCTTGGCTTGTGAACATCATTAACAACGAAA
CAAATCTGACACTTCATAAGTCAATGATAATAAGACTGAAATTTTCATCT
CTTTGTTTTAATTTCCTTGAGGTCCATATTTGAACTGTTCAACACTACCA
TTGATGACAATGTCATCTTTCATGATGGTGTCAGCCTTGACATCAAATTG
ACTCAGCATTTCTTTGCTCGCCTTTAAAAGAGGTGTAGAAATTAGTGTGC
CATGGTGAGTCTGGAAATACCCCTCCATCTGTCCCAAGTGTGGATATGGC
TAAAAGTAATAAATGTTTAGTCTTCAACCACCATTAGTCTAGGTACTTTT
CTGATTTTTCTGAAGGCAATGCATTGATTTCTGAAGTTTCTACAAACACT
AACATTGTTTCTTTATATTACAGGGCAAGAAGCTGGTCACTCTATATAAA
TTGATCTCAAGCTATCTGTGTAATATTACCACACTTGTTCACACCTTATT
TGTCCATTCTTCATCCAAATCAATCCAATGGATCCTTCTTGCAGGCACAA
CCACCCTGTATTCAACTCCTCTCAGGCTTATGAAATCTCATCATACACAC
ACACACACACACACACACACACACACACACAACTCTTGTGAGGCATACAT
TGTCTTTCACAGGTAACATTCTGTGATTTATGGTAGATAAAGAAATTGTG
ACTTTTGTAAA

Query= MSMg01no288_f08.b1 MSMg01no288_f08.b1 CHROMAT_FILE:
MSMg01no288_f08.b1 PHD_FILE: MSMg01no288_f08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:23 2005
         (324 letters)



>mm_chr8_55356277_55357000
          Length = 724

 Score =  611 bits (316), Expect = e-179
 Identities = 319/320 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccacagaatctgaacacatcagaggaattcacctctgtatttccatcgtagaagg 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccacagaatctgaacacatcagaggaattcacctctgtatttccatcgtagaagg 264

                                                                       
Query: 65  gtaaagatgaggaccactcatgaaaacaaaattgggaaggtggacttcctccaatgaaga 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtaaagatgaggaccactcatgaaaacaaaattgggaaggtggacttcctccaatgaaga 324

                                                                       
Query: 125 cagattctttggaatcaatggatgcgccaattgtaccacagagtaactatattctgaaac 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cagattctttggaatcaatggatgcgccaattgtaccacagagtaactatattctgaaac 384

                                                                       
Query: 185 tctatgctacaatgccttttgaagtttctaaagaagaagcatggtgctaaagatttgagc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tctatgctacaatgccttttgaagtttctaaagaagaagcatggtgctaaagatttgagc 444

                                                                       
Query: 245 accaccctgggaaattttaacatgtcaaaaacagaacaaatatcatagatgatatctatg 304
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 445 accaccctgggaaattttaacatgtcaaaaacagagcaaatatcatagatgatatctatg 504

                               
Query: 305 gtatgaagtgcttgacaaca 324
           ||||||||||||||||||||
Sbjct: 505 gtatgaagtgcttgacaaca 524


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space:   225225
Effective search space used:   225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no288_f08.g1 MSMg01no288_f08.g1 CHROMAT_FILE:
MSMg01no288_f08.g1 PHD_FILE: MSMg01no288_f08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:23 2005
         (292 letters)



>mm_chr8_55529527_55530218
          Length = 692

 Score =  534 bits (276), Expect = e-156
 Identities = 288/292 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   cttggcttgtgaacatcattaacaacgaaacaaatctgacacttcataagtcaatgataa 60
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 492 cttggcttgtgaacatcattaacaacaaaacaaatctgacacttcataagtcaatgataa 433

                                                                       
Query: 61  taagactgaaattttcatctctttgttttaatttccttgaggtccatatttgaactgttc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 taagactgaaattttcatctctttgttttaatttccttgaggtccatatttgaactgttc 373

                                                                       
Query: 121 aacactaccattgatgacaatgtcatctttcatgatggtgtcagccttgacatcaaattg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 aacactaccattgatgacaatgtcatctttcatgatggtgtcagccttgacatcaaattg 313

                                                                       
Query: 181 actcagcatttctttgctcgcctttaaaagaggtgtagaaattagtgtgccatggtgagt 240
           ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 actcagcatttctctgcttgcctttaaaagaggtgtagaaattagtgtgccatggtgagt 253

                                                               
Query: 241 ctggaaatacccctccatctgtcccaagtgtggatatggctaaaagtaataa 292
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 252 ctggaaatacccctccatctgtcccaagtgtggatatggctaacagtaataa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space:   193289
Effective search space used:   193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)