Query= MSMg01no289_m16.b1 MSMg01no289_m16.b1 CHROMAT_FILE:
MSMg01no289_m16.b1 PHD_FILE: MSMg01no289_m16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:10 2005
(313 letters)
>mm_chr8_112247470_112248182
Length = 713
Score = 574 bits (297), Expect = e-168
Identities = 306/309 (99%)
Strand = Plus / Minus
Query: 5 gaattccagcagggtatactggaggactacaggcagtgtcctttccttcagcactggagg 64
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 513 gaattccagcagggtatactggaggactacaggcaatgtcctttccttcagcactggagg 454
Query: 65 gaccttcactgtggacttggggtacggattccatattaagtacttgagggagtttctcac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 gaccttcactgtggacttggggtacggattccatattaagtacttgagggagtttctcac 394
Query: 125 tgagaagtaaagatgtttgatggttagtatctccctgaggcaagtaggtcttactcctta 184
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 393 tgagaagtaaagatgtttgatggttagtatctccctgaggcaagaaggtcttactcctta 334
Query: 185 acagctaggcagactgtcccaagtctactgtttgatttgaagggttggaagaccccttct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 acagctaggcagactgtcccaagtctactgtttgatttgaagggttggaagaccccttct 274
Query: 245 cttctttggactagggtacctactatgttttatggcccaccttgaattagcaactgagct 304
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 273 cttctttggactagggtacctactatgttttagggcccaccttgaattagcaactgagct 214
Query: 305 acccaccat 313
|||||||||
Sbjct: 213 acccaccat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no289_m16.g1 MSMg01no289_m16.g1 CHROMAT_FILE:
MSMg01no289_m16.g1 PHD_FILE: MSMg01no289_m16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:10 2005
(134 letters)
>mm_chr8_112069938_112070472
Length = 535
Score = 194 bits (100), Expect = 3e-54
Identities = 115/124 (92%), Gaps = 9/124 (7%)
Strand = Plus / Plus
Query: 1 caatgatgtcttttgcagacatcagggtctgatcttaaaaatggttgcc-----gtttct 55
||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 caatgatgtcttttgcagacatcagggtctgatcttaaaaatggttg--taaatgtttct 258
Query: 56 tttatgagtatggatatattgcctatatgacacgtatgtgtctgccaggtggagatgggg 115
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 259 tttatgagtatggatatattgcctatatgacac--atgtgtctgccaggtggagatgggg 316
Query: 116 gggg 119
||||
Sbjct: 317 gggg 320
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 134
Length of database: 535
Length adjustment: 8
Effective length of query: 126
Effective length of database: 527
Effective search space: 66402
Effective search space used: 66402
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
