Query= MSMg01no294_h15.b1 MSMg01no294_h15.b1 CHROMAT_FILE:
MSMg01no294_h15.b1 PHD_FILE: MSMg01no294_h15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:10 2005
(313 letters)
>mm_chr8_18123812_18124523
Length = 712
Score = 509 bits (263), Expect = e-148
Identities = 294/309 (95%), Gaps = 10/309 (3%)
Strand = Plus / Plus
Query: 5 gaattccataatttgttcatttttagttggagaaaagttgggaccaggatgacgtttgtt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccataatttgttcatttttagttggagaaaagttgggaccaggatgacgtttgtt 264
Query: 65 aattgtattaatgactaaaacatgacttagtcaagacaatgcagaattttcacattttaa 124
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 265 aattgtattaatgactaaaacatgactta-tcaagacaatgcagaattttcacatttt-- 321
Query: 125 tttattttttttttatttgctacagttccaaagacttaaccaagagctcatgtatgctag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 --tattttttttttatttgctacagttccaaagacttaaccaagagctcatgtatgctag 379
Query: 185 gcaagtcctctctgccatgttgtatgcccagcccattactctcacaatttataaaagtga 244
|||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||
Sbjct: 380 gcaagtcctctctgccgtgttgtatgccca-----ttacgctcacaatttataaaagtga 434
Query: 245 atatacatttgtatcaatcttcttaatgaagaaaacatgggcaaaatgggtcatggacgc 304
|||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 435 atatacatttgtatcaatattcttaatgcagaaaacatcggcaaaatgggtcatggacgc 494
Query: 305 tgttgtcag 313
|||||||||
Sbjct: 495 tgttgtcag 503
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 712
Length adjustment: 9
Effective length of query: 304
Effective length of database: 703
Effective search space: 213712
Effective search space used: 213712
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no294_h15.g1 MSMg01no294_h15.g1 CHROMAT_FILE:
MSMg01no294_h15.g1 PHD_FILE: MSMg01no294_h15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:10 2005
(286 letters)
>mm_chr8_18278553_18279238
Length = 686
Score = 487 bits (252), Expect = e-142
Identities = 276/284 (97%)
Strand = Plus / Minus
Query: 2 gtgtacttctgtgtctggatagagatgttataagtatccttgctttccctatctaagctt 61
|||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||
Sbjct: 323 gtgtacttctgtgtctggatagagatgttataagtatctttgctttatctatctatgctt 264
Query: 62 ccaggggctctgagcacagagtagaggcttcctgtttgtaactcctgaggtagagtgaga 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ccaggggctctgagcacagagtagaggcttcctgtttgtaactcctgaggtagagtgaga 204
Query: 122 gagtgagtgagtgagtgtatgtgtgtgtgtgtctgtatgcgtgtgtacatacatatgaat 181
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gagtgagtgagtgagtgtctgtgtgtgtgtgtctgtatgcgtgtgtacatacatatgaat 144
Query: 182 atgcagtaagtcttgtaaaatgtgtcctttgttgttttgtaatgcaattcatagggagta 241
|| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 143 atacagtaagtcttgtaaaatgtgtcctttgttgttttgtaatacaattcatagggagta 84
Query: 242 aatgcataaacattagagtatattccaatgatttctatatctct 285
|||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 83 aatgcataaacattagagtatattccaatgatttatatatctct 40
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
