Query= MSMg01no296_k02.b1 MSMg01no296_k02.b1 CHROMAT_FILE:
MSMg01no296_k02.b1 PHD_FILE: MSMg01no296_k02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:52 2005
(226 letters)
>mm_chr8_116079248_116079873
Length = 626
Score = 422 bits (218), Expect = e-122
Identities = 224/226 (99%)
Strand = Plus / Plus
Query: 1 ccttaaattttgtccccaaagaagcatctatgtccctctgacttgtatatgcaacttcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccttaaattttgtccccaaagaagcatctatgtccctctgacttgtatatgcaacttcaa 260
Query: 61 ttacctttatcacctagctagaatactgaaggttttgcctgaatttccaggttgatccgg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 261 ttacctttatcacctagctagaatactgaaggttttgcctgaatttccaggttgatccag 320
Query: 121 gtaaacagaatggcttgctgtcttcccaatggacacataactaactgcacccttctttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtaaacagaatggcttgctgtcttcccaatggacacataactaactgcacccttctttgg 380
Query: 181 atgtaacagacttggtcattgtttctcattggttctaatgattcct 226
||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atggaacagacttggtcattgtttctcattggttctaatgattcct 426
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 226
Length of database: 626
Length adjustment: 9
Effective length of query: 217
Effective length of database: 617
Effective search space: 133889
Effective search space used: 133889
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no296_k02.g1 MSMg01no296_k02.g1 CHROMAT_FILE:
MSMg01no296_k02.g1 PHD_FILE: MSMg01no296_k02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:52 2005
(283 letters)
>mm_chr8_116277817_116278500
Length = 684
Score = 511 bits (264), Expect = e-149
Identities = 279/284 (98%), Gaps = 1/284 (0%)
Strand = Plus / Minus
Query: 1 caatagaagccagttcattcgtttttatgcaaatgtttttatttgtgcttctccctttta 60
||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 484 caatagaagacagttcattcgtttttatgcaaatgtttttatttgtgtttctccctttta 425
Query: 61 cat-ggggtcttgtgtcttaagtatctctatgtcactcaattgataggcttctctgtgtt 119
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 catgggggtcttgtgtcttaagtatctctatgtcactcaattgataggcttctctgtgtt 365
Query: 120 ctgttttgtagctaaactccatgtcctatgagagagccccaggggcaggtgttcccatga 179
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 364 ctgttttggagctaaactccatgtcctatgagagagccccaggggcaggtgttcccgtga 305
Query: 180 gtaacagataagattgtctatacaacctttcatattcatttctattgtcttcctaggagg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gtaacagataagattgtctatacaacctttcatattcatttctattgtcttcctaggagg 245
Query: 240 gtatggaaggaaagatgctcttgacatagaaataattgaagcag 283
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gtatggaaggaaagatgctcttgacatagaaataattgaagcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 684
Length adjustment: 9
Effective length of query: 274
Effective length of database: 675
Effective search space: 184950
Effective search space used: 184950
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
