TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAAGAGGATCCGCGGA
ATTCACTGTTACCTGAATCTTTTGAATATGGGTCAGATTTTAGGGTCTAA
TTCCTGGCCGTGATTTCATGTGATCTACCATGAAATCTTATTTCAAGTGC
AATTGGGTTGCCTGGCCTTCAGATTCTACCAGGTTTCCCTTTCCTACCCA
GGTCCTTTCCCCAATACCTTGATCCCCAACATCCAACCCTTCCAACTCTT
CCTCCTTCAACACTCACTGTTGCAGGACACTTGTTTGAGAATTTTGAAAA
TATATTAAAAACCTAGTGTTACAGACTTAACCATTGAAAACTATTAGAGG
TCCGCTGGACCAGGTCAGTCCCTCTGGAAAAGCTGTACTTTCTCCTTCAC
TGACATCAGGTGTGAGTATCTGACCTGCTTTGTACAATAAAGGTGAATGG
AAGTGATGTGAGCAGACACTTTGAGCACTGCAGCTTCCTATGGCATTTCT
ATTTTTCTTTTACTCTAAGACCAACAGGCCCCATATAAAAGCCTCTGTTG
TGTGGCACTGTCTCCAAACCCCCACCCCCTGCTTCATCTCCATCCACCCC
TATTCCACATCCTCCCATCTCTGCCCTCCACACCCATCCCTACCCCAGAT
ACTCCCCATCCAACCCCTGGGTCTGGCCAGACTGAATCCGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAG

GCCTGTTTCCCAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCT
TCATTTATTAAGTTCAAGTGTGCTTACTGTTCTCACATAAATAAAAAGTG
TGAGGGTAGACACACACAAGAACAGCAGGTTCCTGGTTGTTGTTATAGCC
TGGCCATAGGCACATGAAACTCCAGATATATTCTTTTTACTTTAAAGTAG
ATCAGAAATATTCTGTAAAAGTTAAATGTATCTCCTTTGTTTTGGTGGGG
ATGGGCATGTACCACAGTGGGTGTTTGGAGGTCAGAGGACATGCTCCAGT
GTCGCTCCACCTTCCACAGACACAATGTCTTGACACAATGTCTCTTGGTC
TTCCATACACATTGTCCAGGCCAGCTGGCCATCAAGATTCAGGGGGACTT
TCTTGCTCCAGACATGCAGTCCCAAATTCAGGGACCATGGGCTCCCTGAA
TTTATTTCCATGGGTTATAGGACCCACATTCAGGCTCTCGGAATAGTGCA
GTGAATGATTGACCAACTTGGGCTCATCTCCCCAGCCCCAAGAGGTAAAT
TTAAAAAGAAACACATAGCAAGATTCACACTTAGTGGTAAATTACGTAAT
ACCTTTTTTGAGTCCATGAACAACATGGTGTACCTAAGGTTCTCAACTGC
TGAGCCATCTCTTCAGCCCTAAAAGCAATTTCTTAACAAGTATTGTATGC
CCTACA

Query= MSMg01no297_c10.b1 MSMg01no297_c10.b1 CHROMAT_FILE:
MSMg01no297_c10.b1 PHD_FILE: MSMg01no297_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:31 2005
         (683 letters)



>mm_chr8_92883947_92885029
          Length = 1083

 Score = 1297 bits (671), Expect = 0.0
 Identities = 677/679 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   ggaattcactgttacctgaatcttttgaatatgggtcagattttagggtctaattcctgg 64
           ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 ggaattcactgttaagtgaatcttttgaatatgggtcagattttagggtctaattcctgg 665

                                                                       
Query: 65  ccgtgatttcatgtgatctaccatgaaatcttatttcaagtgcaattgggttgcctggcc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 ccgtgatttcatgtgatctaccatgaaatcttatttcaagtgcaattgggttgcctggcc 605

                                                                       
Query: 125 ttcagattctaccaggtttccctttcctacccaggtcctttccccaataccttgatcccc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 ttcagattctaccaggtttccctttcctacccaggtcctttccccaataccttgatcccc 545

                                                                       
Query: 185 aacatccaacccttccaactcttcctccttcaacactcactgttgcaggacacttgtttg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 aacatccaacccttccaactcttcctccttcaacactcactgttgcaggacacttgtttg 485

                                                                       
Query: 245 agaattttgaaaatatattaaaaacctagtgttacagacttaaccattgaaaactattag 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 agaattttgaaaatatattaaaaacctagtgttacagacttaaccattgaaaactattag 425

                                                                       
Query: 305 aggtccgctggaccaggtcagtccctctggaaaagctgtactttctccttcactgacatc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 aggtccgctggaccaggtcagtccctctggaaaagctgtactttctccttcactgacatc 365

                                                                       
Query: 365 aggtgtgagtatctgacctgctttgtacaataaaggtgaatggaagtgatgtgagcagac 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 aggtgtgagtatctgacctgctttgtacaataaaggtgaatggaagtgatgtgagcagac 305

                                                                       
Query: 425 actttgagcactgcagcttcctatggcatttctatttttcttttactctaagaccaacag 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 actttgagcactgcagcttcctatggcatttctatttttcttttactctaagaccaacag 245

                                                                       
Query: 485 gccccatataaaagcctctgttgtgtggcactgtctccaaacccccaccccctgcttcat 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gccccatataaaagcctctgttgtgtggcactgtctccaaacccccaccccctgcttcat 185

                                                                       
Query: 545 ctccatccacccctattccacatcctcccatctctgccctccacacccatccctacccca 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 ctccatccacccctattccacatcctcccatctctgccctccacacccatccctacccca 125

                                                                       
Query: 605 gatactccccatccaacccctgggtctggccagactgaatccgagagagagagagagaga 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 gatactccccatccaacccctgggtctggccagactgaatccgagagagagagagagaga 65

                              
Query: 665 gagagagagagagagagag 683
           |||||||||||||||||||
Sbjct: 64  gagagagagagagagagag 46


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 94
Number of extensions: 43
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1083
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1073
Effective search space:   722129
Effective search space used:   722129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no297_c10.g1 MSMg01no297_c10.g1 CHROMAT_FILE:
MSMg01no297_c10.g1 PHD_FILE: MSMg01no297_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:31 2005
         (582 letters)



>mm_chr8_92724934_92725915
          Length = 982

 Score = 1125 bits (582), Expect = 0.0
 Identities = 582/582 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   cttcatttattaagttcaagtgtgcttactgttctcacataaataaaaagtgtgagggta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttcatttattaagttcaagtgtgcttactgttctcacataaataaaaagtgtgagggta 260

                                                                       
Query: 61  gacacacacaagaacagcaggttcctggttgttgttatagcctggccataggcacatgaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gacacacacaagaacagcaggttcctggttgttgttatagcctggccataggcacatgaa 320

                                                                       
Query: 121 actccagatatattctttttactttaaagtagatcagaaatattctgtaaaagttaaatg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actccagatatattctttttactttaaagtagatcagaaatattctgtaaaagttaaatg 380

                                                                       
Query: 181 tatctcctttgttttggtggggatgggcatgtaccacagtgggtgtttggaggtcagagg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatctcctttgttttggtggggatgggcatgtaccacagtgggtgtttggaggtcagagg 440

                                                                       
Query: 241 acatgctccagtgtcgctccaccttccacagacacaatgtcttgacacaatgtctcttgg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acatgctccagtgtcgctccaccttccacagacacaatgtcttgacacaatgtctcttgg 500

                                                                       
Query: 301 tcttccatacacattgtccaggccagctggccatcaagattcagggggactttcttgctc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcttccatacacattgtccaggccagctggccatcaagattcagggggactttcttgctc 560

                                                                       
Query: 361 cagacatgcagtcccaaattcagggaccatgggctccctgaatttatttccatgggttat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagacatgcagtcccaaattcagggaccatgggctccctgaatttatttccatgggttat 620

                                                                       
Query: 421 aggacccacattcaggctctcggaatagtgcagtgaatgattgaccaacttgggctcatc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aggacccacattcaggctctcggaatagtgcagtgaatgattgaccaacttgggctcatc 680

                                                                       
Query: 481 tccccagccccaagaggtaaatttaaaaagaaacacatagcaagattcacacttagtggt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tccccagccccaagaggtaaatttaaaaagaaacacatagcaagattcacacttagtggt 740

                                                     
Query: 541 aaattacgtaataccttttttgagtccatgaacaacatggtg 582
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aaattacgtaataccttttttgagtccatgaacaacatggtg 782


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 982
Length adjustment: 10
Effective length of query: 572
Effective length of database: 972
Effective search space:   555984
Effective search space used:   555984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)