TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAAGAGGAGCCGCGGA
ATTCTTTAGCTATCAAGCACGTTGAGCACGTTGAAAACCCACAGACGTGA
TTAGACTTGGTGGTCTTGTGTGTTTTATCAACCAGTGACATCATGACAGA
TGAGAATGTTCTGCCAAGGAAAGTCAAAATTTCCTAACATTAATGTATCC
ACAGACAAATCACATGTACTAAATGTCATTTAACCCATACAATGATTTGA
ATGTAATCCAGACTCAAAGCAGGAAAAGCAACTTTACTACTGCCAGACTT
ATTATAATGGGACATTTGACTCAATGCAGAATGCCGTCAGGATCCGCAAA
TGCTTGTGAGTTGAATTTAATAGTTTTATAACTATGGTGAGGACTATGCT
GCCTTTGTTGGTTTTATTTCCACCCTTCTCTCATCTGATGAAGCATCAGA
TATCCTACTGAGAAAAACACATTACAGCTAGCAAGCAGTACCTTGACTTT
AATGTCGTCTTTCATCTGTGAATCGCAAAAGAAACACACTAATAAGTAAA
TGAATCGAGTGATGTGTGATAGAACAGAACATTCTACCAAGGAGTCTTTT
AGAGATCAAATCTCTAGCATTAGTGTGTCCAAGGGGAGATTAGACCAAAT
CAGCAGAGCTTCCTCCGAGACAAATAGGCATTACAATTCACTGTGAAGTG
CTTTTTATCGCACACAGCCCCTTCAGCTAAAGGATAATCAAA

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCATGTAGATGCTATATTTTATTATGAA
TGGAGCCTAAGCTGAGGGGAAAGGAGAGGAGTGAAGTGGGCAAGCAGGAG
CTGCAAATGCAAATGTATCGCTGCTGACTTGGTCTTTAACTAGCCTCACA
AATATCATCATAAAGAGCATTAGATGTTTGTGCCCGACCAAATAGCTCAA
CCAAGGAGTGGGTAGCACTAGAATTAGGCTGGGACTAATTGCCTTCCATA
TGCCAAGTTTCACCTCACAAGATCCATCTCCCTTTCGTTTCTGGGGACCA
CATATTCTGATGTCCTAGTGCATCCTATTCTTTAGCTTTAACAAAAATCC
ATGGGTAGAGGAAAAATGACTATGGCATAGATACATAGATGCTGTTACAT
GCTGCTCATGAGTGATGTGGAGGATCTGGTACAATCACTTGATGAGACAC
CCTCTGTCTGGTCATTGCAACAGAAGCACTCAACCCAGGTTCAAGTGAAG
AACACAAGTTCTTATTAAGAGATCTAAGGCTAGCCATGTGTCACATCAGT
TAATCACCCCCCCTCCTCCACACATACACACTATTGAGATTTTTCAAAAG
TTCTTATATGATTATTACCAGATAAGAGGACAATATGATCCTGAAACTAA
TGTGAATGACAATTTATAATATTCTATGTTGATATATTTGC

Query= MSMg01no298_j05.b1 MSMg01no298_j05.b1 CHROMAT_FILE:
MSMg01no298_j05.b1 PHD_FILE: MSMg01no298_j05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:18 2005
         (682 letters)



>mm_chr8_43129244_43130325
          Length = 1082

 Score = 1305 bits (675), Expect = 0.0
 Identities = 678/679 (99%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattctttagctatcaagcacgttgagcacgttgaaaacccacagacgtgattagact 63
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 882 ggaattctttagctataaagcacgttgagcacgttgaaaacccacagacgtgattagact 823

                                                                       
Query: 64  tggtggtcttgtgtgttttatcaaccagtgacatcatgacagatgagaatgttctgccaa 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 tggtggtcttgtgtgttttatcaaccagtgacatcatgacagatgagaatgttctgccaa 763

                                                                       
Query: 124 ggaaagtcaaaatttcctaacattaatgtatccacagacaaatcacatgtactaaatgtc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 ggaaagtcaaaatttcctaacattaatgtatccacagacaaatcacatgtactaaatgtc 703

                                                                       
Query: 184 atttaacccatacaatgatttgaatgtaatccagactcaaagcaggaaaagcaactttac 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 atttaacccatacaatgatttgaatgtaatccagactcaaagcaggaaaagcaactttac 643

                                                                       
Query: 244 tactgccagacttattataatgggacatttgactcaatgcagaatgccgtcaggatccgc 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 tactgccagacttattataatgggacatttgactcaatgcagaatgccgtcaggatccgc 583

                                                                       
Query: 304 aaatgcttgtgagttgaatttaatagttttataactatggtgaggactatgctgcctttg 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 aaatgcttgtgagttgaatttaatagttttataactatggtgaggactatgctgcctttg 523

                                                                       
Query: 364 ttggttttatttccacccttctctcatctgatgaagcatcagatatcctactgagaaaaa 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 ttggttttatttccacccttctctcatctgatgaagcatcagatatcctactgagaaaaa 463

                                                                       
Query: 424 cacattacagctagcaagcagtaccttgactttaatgtcgtctttcatctgtgaatcgca 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 cacattacagctagcaagcagtaccttgactttaatgtcgtctttcatctgtgaatcgca 403

                                                                       
Query: 484 aaagaaacacactaataagtaaatgaatcgagtgatgtgtgatagaacagaacattctac 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 aaagaaacacactaataagtaaatgaatcgagtgatgtgtgatagaacagaacattctac 343

                                                                       
Query: 544 caaggagtcttttagagatcaaatctctagcattagtgtgtccaaggggagattagacca 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 caaggagtcttttagagatcaaatctctagcattagtgtgtccaaggggagattagacca 283

                                                                       
Query: 604 aatcagcagagcttcctccgagacaaataggcattacaattcactgtgaagtgcttttta 663
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 aatcagcagagcttcctccgagacaaataggcattacaattcactgtgaagtgcttttta 223

                              
Query: 664 tcgcacacagccccttcag 682
           |||||||||||||||||||
Sbjct: 222 tcgcacacagccccttcag 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 682
Length of database: 1082
Length adjustment: 10
Effective length of query: 672
Effective length of database: 1072
Effective search space:   720384
Effective search space used:   720384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no298_j05.g1 MSMg01no298_j05.g1 CHROMAT_FILE:
MSMg01no298_j05.g1 PHD_FILE: MSMg01no298_j05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:18 2005
         (660 letters)



>mm_chr8_42960959_42962018
          Length = 1060

 Score = 1276 bits (660), Expect = 0.0
 Identities = 660/660 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   catgtagatgctatattttattatgaatggagcctaagctgaggggaaaggagaggagtg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catgtagatgctatattttattatgaatggagcctaagctgaggggaaaggagaggagtg 260

                                                                       
Query: 61  aagtgggcaagcaggagctgcaaatgcaaatgtatcgctgctgacttggtctttaactag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagtgggcaagcaggagctgcaaatgcaaatgtatcgctgctgacttggtctttaactag 320

                                                                       
Query: 121 cctcacaaatatcatcataaagagcattagatgtttgtgcccgaccaaatagctcaacca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctcacaaatatcatcataaagagcattagatgtttgtgcccgaccaaatagctcaacca 380

                                                                       
Query: 181 aggagtgggtagcactagaattaggctgggactaattgccttccatatgccaagtttcac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggagtgggtagcactagaattaggctgggactaattgccttccatatgccaagtttcac 440

                                                                       
Query: 241 ctcacaagatccatctccctttcgtttctggggaccacatattctgatgtcctagtgcat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctcacaagatccatctccctttcgtttctggggaccacatattctgatgtcctagtgcat 500

                                                                       
Query: 301 cctattctttagctttaacaaaaatccatgggtagaggaaaaatgactatggcatagata 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctattctttagctttaacaaaaatccatgggtagaggaaaaatgactatggcatagata 560

                                                                       
Query: 361 catagatgctgttacatgctgctcatgagtgatgtggaggatctggtacaatcacttgat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catagatgctgttacatgctgctcatgagtgatgtggaggatctggtacaatcacttgat 620

                                                                       
Query: 421 gagacaccctctgtctggtcattgcaacagaagcactcaacccaggttcaagtgaagaac 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gagacaccctctgtctggtcattgcaacagaagcactcaacccaggttcaagtgaagaac 680

                                                                       
Query: 481 acaagttcttattaagagatctaaggctagccatgtgtcacatcagttaatcaccccccc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acaagttcttattaagagatctaaggctagccatgtgtcacatcagttaatcaccccccc 740

                                                                       
Query: 541 tcctccacacatacacactattgagatttttcaaaagttcttatatgattattaccagat 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tcctccacacatacacactattgagatttttcaaaagttcttatatgattattaccagat 800

                                                                       
Query: 601 aagaggacaatatgatcctgaaactaatgtgaatgacaatttataatattctatgttgat 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aagaggacaatatgatcctgaaactaatgtgaatgacaatttataatattctatgttgat 860


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1060
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1050
Effective search space:   682500
Effective search space used:   682500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)