Query= MSMg01no302_p12.b1 MSMg01no302_p12.b1 CHROMAT_FILE:
MSMg01no302_p12.b1 PHD_FILE: MSMg01no302_p12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:44 2005
(683 letters)
>mm_chr8_66880658_66881739
Length = 1082
Score = 1261 bits (652), Expect = 0.0
Identities = 673/680 (98%), Gaps = 1/680 (0%)
Strand = Plus / Plus
Query: 4 ggaattccctgttgcaaaccgaagttgttagattaacatcaaagtctagatagctctcta 63
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccctggtggaaaccgaagttgttagattaacatcaaagtctagatagctctcta 263
Query: 64 ataaatcttattcttggtacttattttttttttattacaaattcattttcccttacaagg 123
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 264 ataaatcttattcttggtacttattttttttt-attacaaattcattttcccttacaagg 322
Query: 124 cccttttctgccttagtatcaaatttcaaacagtcatctttgaattggtccaagcagtta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cccttttctgccttagtatcaaatttcaaacagtcatctttgaattggtccaagcagtta 382
Query: 184 gtaacatttttagttttcttcaccttctctaaagcatagatttagctgttctctagcaac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gtaacatttttagttttcttcaccttctctaaagcatagatttagctgttctctagcaac 442
Query: 244 ccatttctaacatgatgagaatatttctgccattacactcttattgagggtaatttatgt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ccatttctaacatgatgagaatatttctgccattacactcttattgagggtaatttatgt 502
Query: 304 ctaatctatagctgagctctatattggcactttactaaccagtaatctaactcaaattag 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ctaatctatagctgagctctatattggcactttactaaccagtaatctaactcaaattag 562
Query: 364 tttaactgatggaaacacttcagagcagtggttctcagccttcctagcagggaggtcctt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tttaactgatggaaacacttcagagcagtggttctcagccttcctagcagggaggtcctt 622
Query: 424 taatacagttcctcatgcggtggtgactcctaaccataaaattcttttgttgctaactta 483
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 623 taataccgttcctcatgcggtggtgactcctaaccataaaattcttttgttgctaactca 682
Query: 484 taactgtacttttgctacagttactagtcataatgtaaatatctgatacggaggattatc 543
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 683 taactgtacttttgctacagttactaatcataatgtaaatatctgatacggaggattatc 742
Query: 544 tgatatgtgacccctgtgaaagggctgttcaaaaccgccaagaggtggtgaccctcaggt 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 tgatatgtgacccctgtgaaagggctgttcaaaaccgccaagaggtggtgaccctcaggt 802
Query: 604 tgagaaccaccgctttagcgtaccactgagttaagaacaggatgacatctgtgctttatg 663
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 803 tgagaaccaccgctttagcgtaccactgagttaaggacaggatgacatctgtgctttatg 862
Query: 664 aagcctcgaactagtgtcaa 683
||||||||||||||||||||
Sbjct: 863 aagcctcgaactagtgtcaa 882
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1082
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1072
Effective search space: 721456
Effective search space used: 721456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no302_p12.g1 MSMg01no302_p12.g1 CHROMAT_FILE:
MSMg01no302_p12.g1 PHD_FILE: MSMg01no302_p12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:44 2005
(605 letters)
>mm_chr8_67073448_67074452
Length = 1005
Score = 1085 bits (561), Expect = 0.0
Identities = 594/605 (98%)
Strand = Plus / Minus
Query: 1 cactcagttcccgaatggcactgtagaccaatgccatgtatgtctccagaagctgagatt 60
|||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 805 cactcagttcccgaatggcactgtagaccaatgccatgtaagtcttcagaagctgagatt 746
Query: 61 attggcaaagacccaggggattctcatgaggctatcttggggctatgctttgtgaaacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 attggcaaagacccaggggattctcatgaggctatcttggggctatgctttgtgaaacat 686
Query: 121 tgatctagaagattcttgggacctgagttctttacctggaaagaaggaaaatgtagtgct 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tgatctagaagattcttgagacctgagttctttacctggaaagaaggaaaatgtagtgct 626
Query: 181 caggtgatcctcaccacttggggatttttatgggaccaagagactcagatattgtagggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 caggtgatcctcaccacttggggatttttatgggaccaagagactcagatattgtagggc 566
Query: 241 ttattaaatattagcatggctgtctgtgacttgactccaagacacgaggcccgtggagag 300
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 565 ttattaaatattagcatggctgtctgtgacttgactctaagacacgaggcccgtggagag 506
Query: 301 agaggtttgcactccttctcctagaatttcatcggagcaaggactcactgaaagtcaacc 360
|||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 505 agaggtttgcactctttctcctagaatttcatcggagtaaggactcactgaaagtcaacc 446
Query: 361 gagctaatgatgtgctggtcctcagatggcgtcatggccctttcccacatgcgctagctt 420
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 445 gagctaatgatgtgctggtcctcagatggcgtaatggccctttcccacatgcgctagctt 386
Query: 421 tgatgttctgtttcctacagctaaggacggggattactggcgactgcttgctcctggaaa 480
||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 385 tgatgttctgtttcctacagctaaggatggggattactggcgattgcttgctcctggaaa 326
Query: 481 ctataaacttacagcctccgctcctggctacctggcaatcacaaagaaagtggcagttcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctataaacttacagcctccgctcctggctacctggcaatcacaaagaaagtggcagttcc 266
Query: 541 tttcagccctgctgttggggtaagtattcataaaaagagccgagaataataacttgccat 600
||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 265 ttttagccctgctgttggggtaagtgttcataaaaagagccgagaataataacttgccat 206
Query: 601 tgtca 605
|||||
Sbjct: 205 tgtca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1005
Length adjustment: 10
Effective length of query: 595
Effective length of database: 995
Effective search space: 592025
Effective search space used: 592025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
