NNCCCGATCTNNNNNNNCCATTGGGCGCTATAGACTCCTAAGGGAGAGGA
TCCGCGGAATTCCCTCAGGGGTACTTGCCGTTTAACAGTCAAGATTTCCA
TATAAGCTTCCCTCTTAAACCCATTTTACAAAGCTTTGGAAACAGGGAAG
CAGTATTCTCTGGTCTGTGTTGCCTTCCCAGAATGCACTGAGTCCAGCAT
TTTGGCAATGGCAAGCCCTCTCCTTAAGAAGGAAACTTGGGTGATTATTT
CAGAGGTTTTACTCCTCCCACAATGGAGGGGGAGCTGAGGAGAAACAGAA
CTAAGTGCCCAAAGTCTACTCATGCACTAGGATGGACACGAACCCAGTAG
GGATGCAGAAGGCTGTAGAGTGGCTAGTCTTGGGCAAAATGTAATGAGCA
ATAGATGAAAGATGTTGATCTAAGCAGTATGAAGTCAGGCAGGGTAAACT
GAATACCATGAATATCCAAGATGGCGCCACCCACTGACCACGTGAAAGAT
TCCAGACCTCACAAAGAGTCAAAGCGTAGCAGGAATACCCACACTGGGAT
CGAAGCCCACTGGGCTTCTTGCGCTGACTTTCAGCTTCCTGGACTCCTGA
AGCCACACGGTCCAAGGACAGGACTATTCAGGTATCTGAACAAACTTGTT
TCTGTTCTGCTCAAGTGAACTGAGTAGTCTAAGAGGAGAATTGCTTCCAA
GGAAACCAAGCTCAGGCCAAGTGCAGGGTTACAATGTCCATTGTGAGCAC
TGTGAACATCAAATCAACAAACGGTGAATGCCATACTATTCATCCCCGCG
TACACACATATCCTTCTAGTGGGGACCAGATCTCCCGATCCCAGTCTGCT
GTCCNTTAAAGAGANAAATAGTGGACATAAAAAGAATCGGTCCGATAGAT
TTTTGAGCCCCCACGAAGTCCAAGGAAAACCTTTCAAAAAATTGTTTCCT
TTTGTGGGGGAAGAGAAGGGAACACCTTCTCNTTATTTTATCTTTTTACC
CCATCACTTTTTCCNACTATCATTTCTTACTTAATTAACTATATTTTATA
TCTTTTTACTATATATTTTATTTTATCAATTTATAAATACTACTACATTA
CTCTATTTCTCTTCATTTCTACTTCTTCTTTATATTTTTAATTCATACTT
ATANACTATACACTATTNTTTATATTACTCATATGTACTANAAATAACAA
CTTTCTAATTTACTATCTTTTCTCTATCATTTTATATTCTTTTACTTTTA
TNCAACCTACCTATATATTAATNCATTATTATTATATCTCTCTGCTCAAT
ATATAATTCATCTTCTATACATCTCCCATTATCATNTATTTATCTCTTTT
ATCTTCTTATTCTTA

NNCCCGCTTTTNNNNNNNATGCATGGAGGCTGGGGCGCCXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCTCTTTACTGCATTTGATA
TTTAATTCGAATGGCTTAACCCCTTTGATGTTAAATATCTACTTTGGAAA
GCAAAGACCCACTTCTAGAGACACAGGAAACTCAGTGTTCCCAAGGCATA
TGCCAAACTGACACAAGCTAGAGCTATCTGAAAGGAGGGGACCTCGATTG
AGAAAATGGCCCCATAAGACCCAGCTGTAGGGAATTTTCTTAATTGGTGA
TTGATGGGGGAGGGCCCAGCCTATTGTGGGTGGTGCCATCCCTGGGCTGG
TGGTCCTGGGTTTTATAAGAAAGCAGGCTGAGCAAACTGTGAGGAGCAAG
CCAGTAAGCAGCACCTTTCCATGGCCTCCACATCAGCTCCTGCCTCCAGG
TGCCTGCCCTGCTTGAGTTCCTGCCCCGATTTCTTTCAGTGATGACCAGT
GATGTGGAAGTATAAGCCAAATGAGCCCTTTCCTCCCCAGCTTGATTTTT
GGTCATGGTGTTTCATGGCAGCAATAGACGCTCTGATTAAGACAGCCGGT
CATTCTCCTTCTGGCAGCAGTGACATTTCCTGGGTACTAGCAGCCGTGTA
TCTTCTGATGGATAAGCTCTACCTAGCACTCCAGTTTCTAGGCCAGTACT
CATTTCATGTTTAAGCAGGTGACTGATGAAACTAACGGTAACTATTGTGA
CATTTTTCCTGTGTTTATCTTACAGAAATTAACATAAATATATAATACAG
TTGGTGAAGGATTGCGCTACTATGTAGCTTTCTAATATCTTTTTTGTGTG
CGTGTGTGTGTTCAGGCCATTTCATTTCCTAATTAACCTCTTAATTTTAA
AAAAGTTTTTTTTTTTTTTTAAACCACTTCATTATAACTTGCCCCTTGAT
ACCTTACTTACGCACCAAATAGTTTATTCCTCCACTTCGTAATATACCAC
TATTTCTATCCCCCCAATTTTGTTTACTCAAATTATTTCAGTTCTTCTTT
CGTTATTAGCACTTTCTATCTCTATTTTTCCTTTAACTCCCTCATTACTA
TATTATCTCTCATCCATCTTTCTTTTCTTCTTAACCTTCCATTCTTTTTC
CTAGACCACCTCCTTATATTTCCTCACTTTCACGCTTTCTCCTCCCTTCC
TATTGCGTTCTCTTCTATTATATCACTTACCTTTACACCTTCATTCCCTT
ACTATCCTTCATCCTTNTACTTGTATCATCTCTCAGCTCAATCTCTCCAC
TCTCTCCTTCCTAACATTATACATCTTATCTTATCCTACTGTATATCT

Query= MSMg01no304_p07.b1 MSMg01no304_p07.b1 CHROMAT_FILE:
MSMg01no304_p07.b1 PHD_FILE: MSMg01no304_p07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:44:16 2005
         (685 letters)



>mm_chr8_11140682_11141766
          Length = 1085

 Score = 1232 bits (637), Expect = 0.0
 Identities = 673/685 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcaagatttccatataagcttccctcttaaacccattttacaaagctttggaaacaggga 60
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 tcaagatttccatataagcttccctcttaaatccattttacaaagctttggaaacaggga 260

                                                                       
Query: 61  agcagtattctctggtctgtgttgccttcccagaatgcactgagtccagcattttggcaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcagtattctctggtctgtgttgccttcccagaatgcactgagtccagcattttggcaa 320

                                                                       
Query: 121 tggcaagccctctccttaagaaggaaacttgggtgattatttcagaggttttactcctcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggcaagccctctccttaagaaggaaacttgggtgattatttcagaggttttactcctcc 380

                                                                       
Query: 181 cacaatggagggggagctgaggagaaacagaactaagtgcccaaagtctactcatgcact 240
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacaacggagggggagctgaggagaaacagaactaagtgcccaaagtctactcatgcact 440

                                                                       
Query: 241 aggatggacacgaacccagtagggatgcagaaggctgtagagtggctagtcttgggcaaa 300
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 441 aggatggacacgaacccagtagggatgcagaaggccgtagagtggctagtcttgggcaaa 500

                                                                       
Query: 301 atgtaatgagcaatagatgaaagatgttgatctaagcagtatgaagtcaggcagggtaaa 360
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 501 atgtaatgagcaatagatgaaagatgttgatctaagcagtatgaagtcaggcagagtaaa 560

                                                                       
Query: 361 ctgaataccatgaatatccaagatggcgccacccactgaccacgtgaaagattccagacc 420
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 561 ctgaataccatgaatatccaagatggcgccacccactgaccacatgaaagattccaggcc 620

                                                                       
Query: 421 tcacaaagagtcaaagcgtagcaggaatacccacactgggatcgaagcccactgggcttc 480
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 621 tcacaaagagtcaaagcgtagcaggaatacccacactaggatcgaagcccactgggcttc 680

                                                                       
Query: 481 ttgcgctgactttcagcttcctggactcctgaagccacacggtccaaggacaggactatt 540
           ||| |||||||||||||||||||||||||||||||||   ||||||||||||||||||||
Sbjct: 681 ttgtgctgactttcagcttcctggactcctgaagccatgtggtccaaggacaggactatt 740

                                                                       
Query: 541 caggtatctgaacaaacttgtttctgttctgctcaagtgaactgagtagtctaagaggag 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 caggtatctgaacaaacttgtttctgttctgctcaagtgaactgagtagtctaagaggag 800

                                                                       
Query: 601 aattgcttccaaggaaaccaagctcaggccaagtgcagggttacaatgtccattgtgagc 660
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 801 aattgcttccaaggaaaccaagctcaggccaagtgcagggttacaatgtccattctgagc 860

                                    
Query: 661 actgtgaacatcaaatcaacaaacg 685
           |||||||||||||||||||||||||
Sbjct: 861 actgtgaacatcaaatcaacaaacg 885


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1085
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1075
Effective search space:   725625
Effective search space used:   725625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no304_p07.g1 MSMg01no304_p07.g1 CHROMAT_FILE:
MSMg01no304_p07.g1 PHD_FILE: MSMg01no304_p07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:44:17 2005
         (656 letters)



>mm_chr8_11305313_11306368
          Length = 1056

 Score =  745 bits (385), Expect = 0.0
 Identities = 391/393 (99%)
 Strand = Plus / Minus

                                                                        
Query: 264  agcaagccagtaagcagcacctttccatggcctccacatcagctcctgcctccaggtgcc 323
            |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||
Sbjct: 1056 agcaagccagtaagcagcacccctccatggcctccacatcagctcctgcctccaggtgcc 997

                                                                        
Query: 324  tgccctgcttgagttcctgccccgatttctttcagtgatgaccagtgatgtggaagtata 383
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 996  tgccctgcttgagttcctgccccgatttctttcagtgatgaccagtgatgtggaagtata 937

                                                                        
Query: 384  agccaaatgagccctttcctccccagcttgatttttggtcatggtgtttcatggcagcaa 443
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 936  agccaaatgagccctttcctccccagcttgatttttggtcatggtgtttcatggcagcaa 877

                                                                        
Query: 444  tagacgctctgattaagacagccggtcattctccttctggcagcagtgacatttcctggg 503
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876  tagacgctctgattaagacagccggtcattctccttctggcagcagtgacatttcctggg 817

                                                                        
Query: 504  tactagcagccgtgtatcttctgatggataagctctacctagcactccagtttctaggcc 563
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816  tactagcagccgtgtatcttctgatggataagctctacctagcactccagtttctaggcc 757

                                                                        
Query: 564  agtactcatttcatgtttaagcaggtgactgatgaaactaacggtaactattgtgacatt 623
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756  agtactcatttcatgtttaagcaggtgactgatgaaactaacggtaactattgtgacatt 697

                                             
Query: 624  tttcctgtgtttatcttacagaaattaacataa 656
            |||||||||||||||||||||||||||||||||
Sbjct: 696  tttcctgtgtttatcttacagaaattaacataa 664


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space:   675716
Effective search space used:   675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)