Query= MSMg01no308_e11.b1 MSMg01no308_e11.b1 CHROMAT_FILE:
MSMg01no308_e11.b1 PHD_FILE: MSMg01no308_e11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:49:33 2005
(244 letters)
>mm_chr8_17945230_17945873
Length = 644
Score = 246 bits (127), Expect = 1e-69
Identities = 133/135 (98%)
Strand = Plus / Plus
Query: 110 atattgtacgtaatgcagattatcttatatactacacattgtgtgctgcacaatgtcatc 169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 atattgtacgtaatgcagattatcttatatactacacattgtgtgctgcacaatgtcatc 369
Query: 170 aagacacggagttaggaaactggagaatttaaatgctagtctctgctaagctttccattg 229
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aagacacggagggaggaaactggagaatttaaatgctagtctctgctaagctttccattg 429
Query: 230 ggatgagtgcatatg 244
|||||||||||||||
Sbjct: 430 ggatgagtgcatatg 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no308_e11.g1 MSMg01no308_e11.g1 CHROMAT_FILE:
MSMg01no308_e11.g1 PHD_FILE: MSMg01no308_e11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:49:33 2005
(511 letters)
>mm_chr8_18120293_18121203
Length = 911
Score = 801 bits (414), Expect = 0.0
Identities = 486/522 (93%), Gaps = 22/522 (4%)
Strand = Plus / Minus
Query: 1 ttataagctctgtcatcactgtcatttttattacatttattacctatttatttgtgggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 ttataagctctgtcatcactgtcatttttattacatttattacctatttatttgtgggtt 692
Query: 61 cacatgtatgggtatatgagagctattgtgtttctgtggaaatcagaaaaaaacttctgg 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 691 cacatgtatgggtatatgagagctattgtgtttctgtggaaatcagaaaataacttctgg 632
Query: 121 gagttggtcttttttaccaaccatgtgtatccttggggtcaaactcaggttttcagcctt 180
|||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 631 gagttggtgttttctaccaaccatgtgtatccttggggtcaaactcaggttctcagcctt 572
Query: 181 ggggcaagcactgttatccactggactatcttgaagggcctcatcttttgattcttactt 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 571 ggggcaagcactgttatccactgaactatcttgaagggcctcatcttttgattcttactt 512
Query: 241 gaggtatatgttttcatagacaaacagagcatttccagttaggccactgaacacactttg 300
|||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 511 gaggtaaatgttttcatagacaaacagagcatttccagttaggccaccgaacacattttg 452
Query: 301 agattttgtttaattggggcatgttattacagctttacccccccc-------acacaaag 353
|||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 451 agattttgtttaattggggcattttattacagctttac-------taagtggacacaaag 399
Query: 354 aatatgactcatgaggacct----gggggggggggcggtccatgccttacttgggtatgc 409
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 398 aatatgactcatgaggacctatttgggggggggg----tccatgccttacttgggtatgc 343
Query: 410 cgtacttcctgtgactcttcctttctgtccatgcccacactctcatatgtgacttatttc 469
|||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 342 cgtacttcctgtgactcttcctttctgtccatgctcacactctcagatgtgacttatttc 283
Query: 470 ctctgagcagttctgtttctcccaacctttctgtttaagcat 511
|||||||||| |||||||||||||||| |||||||||||||
Sbjct: 282 ctctgagcagctctgtttctcccaacccctctgtttaagcat 241
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
