Query= MSMg01no308_n01.b1 MSMg01no308_n01.b1 CHROMAT_FILE:
MSMg01no308_n01.b1 PHD_FILE: MSMg01no308_n01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:14 2005
(315 letters)
>mm_chr8_7195596_7196310
Length = 715
Score = 576 bits (298), Expect = e-169
Identities = 307/310 (99%)
Strand = Plus / Plus
Query: 6 aattctgtgtgtatatctgtgattatacaagaaattaaaaccaaaagcagcttcatgtag 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 206 aattctgtgtgtatatctgtgattatacaagaaattaaaaccaaaagcagcttcacgtag 265
Query: 66 agacagtcaccttcatttgttttatttgaaataccactgccatatatattagtttgggga 125
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 266 agacagtcaccttcatttgttttatttgaaataccactgccatatacattagtttgggga 325
Query: 126 ttataaacaggcacaatacttgaaatattctaatttgacaagagaaccagtgcatataaa 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ttataaacaggcacaatacttgaaatattctaatttgacaagagaaccagtgcatataaa 385
Query: 186 tggaggagcataagaactaaatcataccataccataaaaatctatacgtacccagacagt 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tggaggagcataagaactaaatcataccataccataaaaatctatacgtacccagacagt 445
Query: 246 tttattgacttaataattttaatttcctagaatatattttactatattctttcctctcct 305
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tttattgacttaataattttaatttcctagaatatattttactatattctttcctctccc 505
Query: 306 tcccactgtc 315
||||||||||
Sbjct: 506 tcccactgtc 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no308_n01.g1 MSMg01no308_n01.g1 CHROMAT_FILE:
MSMg01no308_n01.g1 PHD_FILE: MSMg01no308_n01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:14 2005
(288 letters)
>mm_chr8_7271541_7272228
Length = 688
Score = 549 bits (284), Expect = e-161
Identities = 287/288 (99%)
Strand = Plus / Minus
Query: 1 ctcatttggattctgcaatgtggaagcccagttctgagaagttgatgctgtcatgtttac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 ctcatttggattctgcaatgtggaagcccagttctgagaagttgatgctgtcatgtttac 429
Query: 61 cctgagccatgaagatagaggaacatcacactctggaatgggctcttctctatttctggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 cctgagccatgaagatagaggaacatcacactctggaatgggctcttctctatttctggt 369
Query: 121 ctttccatgttttctgataaatcaaggtaggtgctaggagtgaacaaggcaagttcatag 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ctttcaatgttttctgataaatcaaggtaggtgctaggagtgaacaaggcaagttcatag 309
Query: 181 gcataagcaatgggaagaaatccataatatagctataaaccccttttaaaaatgattact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gcataagcaatgggaagaaatccataatatagctataaaccccttttaaaaatgattact 249
Query: 241 catatttaaatatgaaagaacaatataattctcaggatgtatgcaaag 288
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 catatttaaatatgaaagaacaatataattctcaggatgtatgcaaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
