Query= MSMg01no311_d13.b1 MSMg01no311_d13.b1 CHROMAT_FILE:
MSMg01no311_d13.b1 PHD_FILE: MSMg01no311_d13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:52:00 2005
(314 letters)
>mm_chr8_116079157_116079871
Length = 715
Score = 586 bits (303), Expect = e-172
Identities = 309/311 (99%), Gaps = 1/311 (0%)
Strand = Plus / Plus
Query: 5 gaattcttcacactcaatctgtccctcatgaa-tcaggtttgaccctgtgcctggagtta 63
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 205 gaattcttcacactcaatctgtccctcatgaaatcaggtttgaccctgtgcctggagtta 264
Query: 64 tgcagcccgggtcatctttaaggcaagccttaaattttgtccccaaagaagcatctatgt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgcagcccgggtcatctttaaggcaagccttaaattttgtccccaaagaagcatctatgt 324
Query: 124 ccctctgacttgtatatgcaacttcaattacctttatcacctagctagaatactgaaggt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccctctgacttgtatatgcaacttcaattacctttatcacctagctagaatactgaaggt 384
Query: 184 tttgcctgaatttccaggttgatccgggtaaacagaatggcttgctgtcttcccaatgga 243
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 385 tttgcctgaatttccaggttgatccaggtaaacagaatggcttgctgtcttcccaatgga 444
Query: 244 cacataactaactgcacccttctttggatggaacagacttggtcattgtttctcattggt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cacataactaactgcacccttctttggatggaacagacttggtcattgtttctcattggt 504
Query: 304 tctaatgattc 314
|||||||||||
Sbjct: 505 tctaatgattc 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 715
Length adjustment: 9
Effective length of query: 305
Effective length of database: 706
Effective search space: 215330
Effective search space used: 215330
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no311_d13.g1 MSMg01no311_d13.g1 CHROMAT_FILE:
MSMg01no311_d13.g1 PHD_FILE: MSMg01no311_d13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:52:01 2005
(246 letters)
>mm_chr8_116257930_116258575
Length = 646
Score = 398 bits (206), Expect = e-115
Identities = 233/242 (96%)
Strand = Plus / Minus
Query: 5 taagtcggtgtccagatcttaccgaggtgggtgtgttaaaaactcacttcagctgctgaa 64
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||
Sbjct: 446 taagtcggtgtccagatcttactgaggtgggtgtattaaaaactcacttcagctgttgaa 387
Query: 65 tggaaacatgatttgagggacacaaagtgaaccgagagacaacggaaacggattcatctt 124
|||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 386 tggaaacatgatttgagggacacaaagtgaactgagagacaacagaaacggattcatctt 327
Query: 125 taattccagataagaagtgctaaaaactgacactgggggtgtgaacatgaagggattgga 184
|| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 326 tagttccagataagaagtgctaaaaactgacactgggggtgtgaacatgaagagattgga 267
Query: 185 cttgcttgtagtataaatgtagatagaaagtaggaaggaaggctctagagatacctggga 244
|||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 266 cttgcttgtagtataaatgtagatagaaagtaggaaggaaggttctagagatacccggga 207
Query: 245 ta 246
||
Sbjct: 206 ta 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
